Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00382 ATGGGGTTATGCAATAAGGTTTCATATTCTCTAATATGTGTGTTGGGCTTAGTCATTATCATGGATCATGTTGCCTATGCTCAAGACTCACCACAAGACTACGTGAATGCCCATAACGCTGCAAGAGCACAGGTGAGAGTTCCAAATTTGGTTTGGGATGAAACAGTTGCTACTTTTGCAAGGAACTATGCTAATCAACGTAAGGGTGATTGCAAACTGGTCCACTCAGGTGGTGGTGGGCGTTACGGGGAGAACCTGGCAATGAGCACTGGTGACCTAAGTGGAAGAGATGCAGTGAGATTGTGGGTGAATGAGAAAGCCAACTATGACTACAATTCTAACAAATGTGTTGGTGGGGAGTGTCTGCACTATACTCAGGTTGTTTGGAAGAACACAAAACGCGTTGGATGTGCCAAAGTGAGATGTAATACTGGAGGCACTTTCATCGGTTGTAACTATGACCCTCCTGGCAACTATGTTGGCCAAAGACCCTACTAA 498 0.4498 MGLCNKVSYSLICVLGLVIIMDHVAYAQDSPQDYVNAHNAARAQVRVPNLVWDETVATFARNYANQRKGDCKLVHSGGGGRYGENLAMSTGDLSGRDAVRLWVNEKANYDYNSNKCVGGECLHYTQVVWKNTKRVGCAKVRCNTGGTFIGCNYDPPGNYVGQRPY* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00382 165 Gene3D CAP 29 165 IPR035940 -
Rops11g00382 165 FunFam Putative pathogenesis-related protein 1 28 165 - -
Rops11g00382 165 CDD CAP_PR-1 31 165 - -
Rops11g00382 165 PRINTS Allergen V5/Tpx-1 family signature 50 68 IPR001283 -
Rops11g00382 165 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Rops11g00382 165 PRINTS Allergen V5/Tpx-1 family signature 121 137 IPR001283 -
Rops11g00382 165 PRINTS Allergen V5/Tpx-1 family signature 148 161 IPR001283 -
Rops11g00382 165 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 162 IPR001283 -
Rops11g00382 165 ProSitePatterns CRISP family signature 2. 148 159 IPR018244 GO:0005576
Rops11g00382 165 Pfam Cysteine-rich secretory protein family 35 153 IPR014044 -
Rops11g00382 165 SUPERFAMILY PR-1-like 9 165 IPR035940 -
Rops11g00382 165 SMART SCP_3 29 161 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00382 Rops-Chr11 5216392 5216889 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00382 K13449 - gmx:100806194 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00382 11 5216392 5216889 Rops11g00382 11 5216392 5216889 ECH