Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00380 ATGTCAAGGCGGCCAGTAAATCCTTCACGTCGGTTGGCTGATGCTGGAAGTATACCATTTGTGGCTTCTATCCAGTCTAAATCTCAGAACTCTCCCCTACTATCTATTGGGCTTGTTATCGTGGGTGCGATCCTTCTGATTGGTTATTGTTACAGTGGTTCAGGTGGATCTAGCAGTGATATTAAGGATGCAAGTAAACTTGAAGGTGGTGCATCATGCACATTCGAAGTCCTGCAAGCATTGCCCATTTTGAAGAAAGCATATGGAGACAGCATGCATAAGGTTTTGCATGTTGGCCCTGACACTTGTTCTGTGGTATCTAGTTTGTTAGAAGAAGAGGATACTGAGGCTTGGGGAATAGAGCCATATGAATTAGATGATGTAGGTGCAAGGTGTAAAAGTCTTGTACGCAAGGGCATTGTGCGAGTGGCTGACATAAAGTTTCCTCTACCCTACCGTCCAAAGTCATTTTCTCTTGTCATGGTGTCAGATGTGTTGGATTACTTATCCCCAAAATACCTGAATAGAACCTTGCCAGAGTTGGTGAGGGTATCTTCAGATGGTGTTGTCATTTTTGCAGGTTATCCAGGTCAGCAGAGAGCTAGAGGTGGAGAAGTGGCCAAATTTGGTCGTCCAGCCAAATTGCGGAGCTCATCTTGGTGGATAAGGTTTTTCGTTCAGTCTAGTTTAGAAGAAAATGAAACTGCTGGAAAGAAGTTTGAACAGGCTTCAACCAAGAAGGGATACAAGCCAGCATGCCAAGTTTTTCATCTTAAATCATACCCTTAA 789 0.4373 MSRRPVNPSRRLADAGSIPFVASIQSKSQNSPLLSIGLVIVGAILLIGYCYSGSGGSSSDIKDASKLEGGASCTFEVLQALPILKKAYGDSMHKVLHVGPDTCSVVSSLLEEEDTEAWGIEPYELDDVGARCKSLVRKGIVRVADIKFPLPYRPKSFSLVMVSDVLDYLSPKYLNRTLPELVRVSSDGVVIFAGYPGQQRARGGEVAKFGRPAKLRSSSWWIRFFVQSSLEENETAGKKFEQASTKKGYKPACQVFHLKSYP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00380 262 Gene3D Vaccinia Virus protein VP39 74 249 IPR029063 -
Rops11g00380 262 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 261 IPR044689 GO:0008168|GO:0045488
Rops11g00380 262 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 93 230 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00380 Rops-Chr11 5180375 5186530 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00380 K23871 - gmx:100800870 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00380 11 5180375 5186530 Rops11g00380 11 5180375 5186530 ECH