Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00352 ATGGGGAAAAAGCGTGTAATGGTGCCGGCGAAGGACGTTGATTTGTCCTCCGTCAAATACGAACCTGAAGTTGTTCAAGCTCCACATTTGACTGGCTTTGTGTTTCGATTGTTTGTGAGGATTCTCGAAGCTCCATTGCTAGGCCCTCTCATTATGACTTTTTTGAAGAAGCAAAATAGAATTGATGAGTTTTTGCGGCACACTGTGATACCTGAGGAACCTATGTTTAAACCTGAATATCCTCCTCAAGAAATGGAACCTGATGTCGTTGTCCTTGACGAAGATGGGAGACCCGAAGATCGAGTTGAGTCTACCTTGAAATGTCTTCCACATTATGATCCTGCTGAATTCTTGGAAAATTCATCCGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTATCGATTTAGAAAAGTAACCCCATCTATGGTTGCTGAGCGCATCATCTCAATTATAGAGGAGAATGGAAGAAATAAACCTCCCACACCACTATTGATATCCTTTGATGCTGAAGAGGTCCGGAGGCAGGCAGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTATCAATATTGGATGGAATTTTCATGGCCATCAAAGATGACATAGACTGCTATCCTCATCCAACTAAGGGTGGATCTACATGGATGCATGAGGTACGCACTGTAAAGAAGGATGCTGTCTGTGTTTCAAGACTGCGTAGCTGTGGTGTCATATTCATAGGGAAGGCAAATATGCATGAGTTTGGCATGGGAACAACAGGAAATAACCCTAATTATGGAACTACAAGAAATCCTCATGCGCCTGATAGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATAGTTGCTTCTGGACTATGTTCTGCTGCACTGGGAACTGATGGTGGAGGTTCGGTCCGTATTCCTTCTTCTCTTTGTGGTGTGGTGGGATTGAAATCAAATTATGGGCGGACAAGCATGGAGGGGTCATTATGTGATGCTGGGACAGTGGAAATTATTGGACCCATTGCTTCTACAGTAGAGGATGTGATGCTAGTGTATGCGGCAATGTTGGGTGCATCACCTGCAAATAGAATCAGTATGAAACCGTCACCGCCTTGTTTGCCAACTCTGTCATTTAATGATGATTCAAATACTTTGGGATCATTAAGAATAGGAAAGTACACGCCGTGGTTTAATAATGTCCATGCAACTGAAGTCTCTGATAGATGTGAGGATGCTCTTAATCTGCTGTCAAAGACACATGGTTGTGAAATGATAGAAGTTGTTATACCAGAGCTTCTTGAGATGCGAACTGCCCATCTTGTTTCCATTGGCTCTGAATGCTTATGTTCACTGAATCCTGATTGTGAAGATGGGAAAGGTGTAAAATTGACATATGATACTCGTACAAGTTTGGCACTCTTCCGGACGTTTACAGCAGCAGATTATGTTGCAGCCCAATGTATTAGACGAAGGATTATGTATTACTTCTTGGAGATTTTCAAGAAAGTTGATGTCATAGTGACTCCGACATCTGGCATGACAGCACCCAAGATACCTCCTAATGCTCTCAAAAGTGGTGAAACAGATATGCCGACTACAGGTTACCTCATGCGGTTCGTTGTTCCAGCAAATCTTCTGGGACTACCTGCCATTTCTGTCCCGGTCGGTTACGATAAAGAAGGACTTCCAATAGGTTTGCAAATAATAGGTCGACCGTGGGCGGAAGCTACTATTCTGCGTGTAGCATCTGCAGTAGAGAAACTCTGCGGTGAGTCAAAGAAAAGGCCCGTGTCATACTATGATGTTCTGAGGGCTAACTGA 1824 0.4364 MGKKRVMVPAKDVDLSSVKYEPEVVQAPHLTGFVFRLFVRILEAPLLGPLIMTFLKKQNRIDEFLRHTVIPEEPMFKPEYPPQEMEPDVVVLDEDGRPEDRVESTLKCLPHYDPAEFLENSSASFRYWKIRDYAHAYRFRKVTPSMVAERIISIIEENGRNKPPTPLLISFDAEEVRRQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPTKGGSTWMHEVRTVKKDAVCVSRLRSCGVIFIGKANMHEFGMGTTGNNPNYGTTRNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKSNYGRTSMEGSLCDAGTVEIIGPIASTVEDVMLVYAAMLGASPANRISMKPSPPCLPTLSFNDDSNTLGSLRIGKYTPWFNNVHATEVSDRCEDALNLLSKTHGCEMIEVVIPELLEMRTAHLVSIGSECLCSLNPDCEDGKGVKLTYDTRTSLALFRTFTAADYVAAQCIRRRIMYYFLEIFKKVDVIVTPTSGMTAPKIPPNALKSGETDMPTTGYLMRFVVPANLLGLPAISVPVGYDKEGLPIGLQIIGRPWAEATILRVASAVEKLCGESKKRPVSYYDVLRAN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00352 607 PANTHER TRANSAMIDASE 120 603 IPR000120 GO:0003824
Rops11g00352 607 Pfam Amidase 169 580 IPR023631 -
Rops11g00352 607 SUPERFAMILY Amidase signature (AS) enzymes 109 590 IPR036928 -
Rops11g00352 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Rops11g00352 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00352 Rops-Chr11 4850153 4861206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00352 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.105 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00352 - - gmx:100778732 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00352 11 4850153 4861206 Rops11g00352 11 4850153 4861206 ECH