Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00346 ATGGATGGTGAAACTTCAGCAGAGATGGCTCCCATGGAGCACCGAATCTACCCTTTTTATCATACAGGCTTGGTGAAGAAGAGAGCTTACGTATTTGATGGTTGTGGGAATTTTTATAACAAGGATTGGGACCTAGCAGACCTTTATCAAAAAGAAGAAAAGGAATGGGAAGTAGCAGAAGGCAGAGGGAACGAGTTTTCTTGGTACCATGTGGAACTCCCTAAAGGAAATCAAAAGTTGTCACAATCTGCACAGGACCTGATTGGTGTTCTCTGCCCGCCTTTGAAGCTCCAAGACATTCTCTCACTTGTTAGCAATGGACCCTTTTGTGCACATGTAGATGGGGCACTTGTCTTTCGGGTTAATTCACCTGGTCCTCCCTCCAGTGACTTCACATTTAGAATTGCTGCTAGAGTCACGGAAAAATCAGTAATCACCGTGTCCTTGGGGCGTGTTCCCCGGTTAGGTTTCTCGCGCATGGGTGAATCTCTACTTTCGGAAATTCCTAGGGTTGAAAGCTCCTCTCCTTTTAGAGGTCAGCAGAAGGAAAGAAGTGGGATTGTGATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGACGAAGCTGACAACCCTGTGCCTAGATCTGTCTCAAATCTTGTAGTTCACATAATTGACACACATGTAGATCAGCTTCAAGATCTTGTGACAAAGCTTGAGATGGAGTTGGACTCAGTAGAGCTTGAATTGGATAAAGGTGGTTATGCTTTGAAGAAACAAATGCTGGATGATAGAAGATTCCCCAAACTGCATATTAATTTGCAGCGTCTCCTGCAGGTGATTAGCCATGGAGAACAAGTATATCTCCGTGTCAAAGAAAAATGCTCTTCAAAAAGATGGTTTGCGAATAAAGACATCAACTCCCTGGAAGAACTAATTGGAAGATTAAGGAGGCTGAAGGAGAATGTAGGGTTTATAGTAAATCGTGTCACAGCAATTCAGGCTGGTCTTGACAGCTGGCAGTCAGAGCAAATAAACAGGAAACTGTACTATCTCTCATTCCTTTCAATAATATTCCTCCCTTTGTCCATCATAACAGGAGTGTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGTCAAAATGTGCCAGAGCTAAAGGATGGTTTTCGTAATGTCATGTTACTTTGTGTTGCTATGCTACTTCTTGTACTGCTATGCTTCATTTTCCCAGCTCTTTATACCCGTATAGTTGCTGCATGGCGAAGTAAGAGAGCTCTGGGGAGAAACTGGTCACTGAACAGGAAATCATTGCTAAGGAGACCATTAAGAATAGGAGATCATGAAAGAGGAGGCTACCTTCGGATTTAA 1362 0.4295 MDGETSAEMAPMEHRIYPFYHTGLVKKRAYVFDGCGNFYNKDWDLADLYQKEEKEWEVAEGRGNEFSWYHVELPKGNQKLSQSAQDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVTEKSVITVSLGRVPRLGFSRMGESLLSEIPRVESSSPFRGQQKERSGIVIKEHVLEFLLTMNHSDEADNPVPRSVSNLVVHIIDTHVDQLQDLVTKLEMELDSVELELDKGGYALKKQMLDDRRFPKLHINLQRLLQVISHGEQVYLRVKEKCSSKRWFANKDINSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNVPELKDGFRNVMLLCVAMLLLVLLCFIFPALYTRIVAAWRSKRALGRNWSLNRKSLLRRPLRIGDHERGGYLRI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00346 453 Pfam CorA-like Mg2+ transporter protein 208 406 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops11g00346 453 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 341 405 IPR045863 -
Rops11g00346 453 Gene3D Magnesium transport protein CorA, transmembrane region 211 337 - -
Rops11g00346 453 Coils Coil 226 246 - -
Rops11g00346 453 Coils Coil 299 319 - -
Rops11g00346 453 Gene3D Magnesium transport protein CorA, transmembrane region 338 410 - -
Rops11g00346 453 SUPERFAMILY CorA soluble domain-like 29 332 IPR045861 -
Rops11g00346 453 PANTHER OS08G0130000 PROTEIN 4 453 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00346 - - gmx:100817220 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00346 11 4773775 4777180 Rops11g00346 11 4773775 4777180 ECH