Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00317 ATGGGGGAGACGACAGAGAAGGTGAAGGCGGAAGCGTTGCAGATAATTGGAGCTTTCCAAGTTCTTCCAAAGCTTGTCGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGCGAAATGCCTTCTCTGTATCCCCACGCTAAGGGCATATTATTGGCACTCAAAGAGAAAGGCATTGATGTTGCCATTGCTTCTCGATCACCAACTTCTGATATTGCAAACGCTTTCCTCAACAAATTGGGCATCAACTCTATGCTCGTTGCCAAGGAAATATATTCCAGTTGGACCCACAAGACTGATCATTTTCAGAGGATTCATTCAACCACTGGAGTCCCCTTTCACTCTATGCTCTTCTTTGATGATGAAAATAGGAACATCCAAGCGGTCTCTAAGATGGGAGTGACTAGCATTTTGGTTGACGATGGGGTAAATCTTGGGGCGTTATCTCAAGGCCTTACTCAATTCTCTCGAAACTGGAATGCATCCCAGAAGAACAAGCAGAAATGGCTCAAAGATTACTGTCACAAGCCAGATACTTCCAACTCCAACCATGCTCCTTGA 582 0.4519 MGETTEKVKAEALQIIGAFQVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTSDIANAFLNKLGINSMLVAKEIYSSWTHKTDHFQRIHSTTGVPFHSMLFFDDENRNIQAVSKMGVTSILVDDGVNLGALSQGLTQFSRNWNASQKNKQKWLKDYCHKPDTSNSNHAP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00317 193 SFLD C1.5.2: MDP Like 4 171 - -
Rops11g00317 193 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 3 172 IPR010036 GO:0016791
Rops11g00317 193 NCBIfam HAD-IIIC family phosphatase 24 139 IPR010033 -
Rops11g00317 193 CDD HAD_MDP-1_like 23 146 IPR035679 -
Rops11g00317 193 SUPERFAMILY HAD-like 23 156 IPR036412 -
Rops11g00317 193 Gene3D - 5 170 IPR023214 -
Rops11g00317 193 FunFam Magnesium-dependent phosphatase 1 8 168 - -
Rops11g00317 193 Pfam Acid Phosphatase 22 164 IPR010036 GO:0016791
Rops11g00317 193 SFLD Haloacid Dehalogenase 4 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00317 Rops-Chr11 4395933 4396980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00317 K17619 - gmx:100305763 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01840 2 28751769 28753123 Rops11g00317 11 4395933 4396980 PCT