Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02688 ATGTCTAGCATCGTCCAGGAGATCCTTGCGAGCCCCATTCAAATGGCGGTTCAGGTATCCACCATGGCTGAACAGGCCCAGAATTTCAGACAGGATTGTCTCGAGCTCAAAACCAAAGTTGACAAGCTTACTGCTCTCCTCCGACAAGCCGCAAGGAACCGTAATGACTTGTATGAGCGTCCCACAAGGCGCATCATCGACGACACCGAACAAGTCTTGGACAAAGCCCTTGTACTTGTCACCAAATGTCGTGTCAATGGTCTCAAGCGTCTTTTCACCATCATCCCCGCCAACGCTTTTCGCAAAATCTCCATGCAGCTCGAGAATTCCGTTGGTGATGTCCAATGGCTCCTCCGTGTCTCCGCTTCCGCCGATGAACGTGACGATGAGTATCTTGGTCTTCCTCCCATTGCTGCCAATGAACCTATTCTCTGCCTCATATGGGAACAGGTTTCTATTTTACTCTCTGGGTGTTCCTCAGAGGAACGTTCAGATGCTGCTGCTTCCTTGGTTTCTCTTGCTCGTGACAATGACCGTTATGGGAAACTTATTATTGAGGAAGGTGGAGTGCCCCCACTTCTCAAGTTGCTCAAAGAAGGGACAACGGAGGGTCAGGAGAATGCTGCCAGGGCTATTGGGTTGCTCGGGAGGGATCCTGAGAGCGTGGAGCACATTGTGAATGCTGGTGTTTGCATTGTGTTTACCAAAATCCTCAAAGATGGTCACATGAAGGTTCAGACAGTGGTGGCATGGGCTATTTCGGAGCTGGCTGCAAATCACCCTAAATGCCAGGATCACTTCTCTCAGAACAATGCCATACGCTTGCTTGTTAGCCATCTTGCATTTGAGACCATTCAAGAGCACAGTAAGTACGCTATTGCAAGTAAACAAAAGATGTCCATTCACTCGGTTGTAATGGCCAGTAATACACCAAATCCCGATGTTGATAAGAAAAATGTGCAAGAAGATGATAACAAGCAGATTTCTCATCCAATGGGGAACCTTACACCTAGCCAAATGCACAATGTGGTCTCTAACACATTGGCCATAAAGGGTCAGGAGGGGCAAGGAGATAATGCAAAGTTGAACAATGCAAAGAAGCAACAGCACCAAGGGAATGGGAATCCGCACGTGTCAATTTCGGGGACAAGTATTAAAGGGAGGGAATTCGAAGATCCAGTAACCAAGGCACAGATGAAGGGCATGGCAGCTAGAGCACTATGGCAACTCTCCAAGGGAAACTTGACTATATGTCGGAGCATAACTGAATCAAGAGCTCTTCTATGCTTTGCGGTTCTGTTAGAAAAAGGTCCTGAAGATGTGAAATCATATTCAGCAATGGCGTTGATGGAAATCACAGCTGTAGCTGAGCAACATGCAGAGTTGAGATGCTCAGCTTTCAAGCCTACTTCACCTGCTGCCAAGGCTGTTGTAGAACAGCTTCTTAAAGTTATTAAGAAAGCAGACTCTGACCTTCTCATACCTTGCATTAAGGCTATTGGTAACTTGGCAAGGACTTTTAGAGCATCAGAAACAAGAATCCTTGGTCCATTGGTGAGACTGCTTGATGAAAGGGAACCAGAAGTTTCCTTGGAAGCCGCCATTACACTCAATAAATTTGCTTGTACAGATAACTATCTCCATGAGAATCATTGCAATGCCATTATAGAGGCAGGTGGTGCAAAGCATTTGATTCAATTGGTTTACTTCGGGGAGCAAATGCTACAAATTCCTTCCTTCATTCTTCTCTGTTACATAGCACTACATGTCCCCAAAAGTGAGACTCTTGCGCAAGAAGACGTCCCCATAGTTCTTGAGTGGTCAACGAAACAGGCGCATCTGGTCAATGAACCCTCCATTCAAGCTCTATTACCAGAAGCCAAAAGTAGGTTGGAACTCTATCAATCAAGAGTTCCAAAAGCATACCACTGA 1932 0.4617 MSSIVQEILASPIQMAVQVSTMAEQAQNFRQDCLELKTKVDKLTALLRQAARNRNDLYERPTRRIIDDTEQVLDKALVLVTKCRVNGLKRLFTIIPANAFRKISMQLENSVGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVSILLSGCSSEERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGTTEGQENAARAIGLLGRDPESVEHIVNAGVCIVFTKILKDGHMKVQTVVAWAISELAANHPKCQDHFSQNNAIRLLVSHLAFETIQEHSKYAIASKQKMSIHSVVMASNTPNPDVDKKNVQEDDNKQISHPMGNLTPSQMHNVVSNTLAIKGQEGQGDNAKLNNAKKQQHQGNGNPHVSISGTSIKGREFEDPVTKAQMKGMAARALWQLSKGNLTICRSITESRALLCFAVLLEKGPEDVKSYSAMALMEITAVAEQHAELRCSAFKPTSPAAKAVVEQLLKVIKKADSDLLIPCIKAIGNLARTFRASETRILGPLVRLLDEREPEVSLEAAITLNKFACTDNYLHENHCNAIIEAGGAKHLIQLVYFGEQMLQIPSFILLCYIALHVPKSETLAQEDVPIVLEWSTKQAHLVNEPSIQALLPEAKSRLELYQSRVPKAYH* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02688 643 FunFam Armadillo repeat only 2 149 320 - -
Rops10g02688 643 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Rops10g02688 643 Gene3D - 3 120 IPR036537 GO:0007166
Rops10g02688 643 Gene3D - 388 625 IPR011989 -
Rops10g02688 643 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 230 IPR000225 GO:0005515
Rops10g02688 643 SMART arm_5 218 258 IPR000225 GO:0005515
Rops10g02688 643 SMART arm_5 470 505 IPR000225 GO:0005515
Rops10g02688 643 SMART arm_5 414 454 IPR000225 GO:0005515
Rops10g02688 643 SMART arm_5 548 588 IPR000225 GO:0005515
Rops10g02688 643 SMART arm_5 176 217 IPR000225 GO:0005515
Rops10g02688 643 SUPERFAMILY ARM repeat 153 601 IPR016024 -
Rops10g02688 643 FunFam Armadillo repeat only 2 377 631 - -
Rops10g02688 643 Coils Coil 33 60 - -
Rops10g02688 643 Gene3D - 149 321 IPR011989 -
Rops10g02688 643 PANTHER ARMADILLO REPEAT ONLY 4 1 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02688 Rops-Chr10 46591580 46593762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02688 - - gmx:100807066 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02688 10 46591580 46593762 Rops10g02688 10 46591580 46593762 ECH