Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02686 ATGGGTTCTCAAGTGTCTAAACAGGTTGATCGAAGAAAGACAATCCATACCCAGAAGAAAACCCTATCTGACCTTAAAAGCTCTGGTGAAGACTACCCTGGCTCTGAATACCATCCCCAAGAAAGGAAAAATTGGATGGGTGGTCTCAACCCAGAGAAAGTTCACATCAATCAGATTGTATGGCCTGGAACCCATGATTCTGCAACCAACAAGATTGGCATCCCATGCATCACTCGCCCTTTTGCTCAATGCCAATCCTTGTCCATCTATCACCAGCTTGTGAGAGGCACACGTGTTCTTGACATTCGTGTGCAGGAGAATCGCCGTGTGTGCCATGGAATTCTTGTCACATACAGCATCGATGTTGTCATCAAGGATGTCAAGAAGTTTTTGTCAGAAACACAGTCTGAGATCATCATTCTCGAGATTAGAACTGAGTTTGGTCACGAGGACCCACCTGAATTTGACAAGTACTTGGAGGAACAACTAGGTGAGTTCTTGATTCCTCAGGATGATCACATTTTTGGCAAGACCATTGCAGAGTTGTTACCTAAGAGAATTATATGTGTTTGGAAGCCAAGAAAATCGCCACAGCCCAAGGCAGGGAGTCCCCTTTGGAGTGCAGGATTTTTGAAGGATAATTGGATCGACACAGATCTGCCATCAACCAAGTTTGATGGCAATTTGAAGCATTTGAGCGAGCATCCACCGGTTACATCGAGGAAATACTTTTACAGGGTGGAGAACACGGTTACCCCGGTGGCAGATAACCCAGTTGTGTGTGTGAAACCTGTTACAAGACGCATTCATGGGTATGCTAGGCTCTTCATCGCTCAGTGCTTCGCTAAGGGCTATGCAGATAGACTTCAGGTTTTTTCCACGGATTTTATAGATGAGGATTTTGTTGATGCATGTGTTGGACTCACTCATGCGAGGATTGAAGGGAAAGCCTGA 954 0.4528 MGSQVSKQVDRRKTIHTQKKTLSDLKSSGEDYPGSEYHPQERKNWMGGLNPEKVHINQIVWPGTHDSATNKIGIPCITRPFAQCQSLSIYHQLVRGTRVLDIRVQENRRVCHGILVTYSIDVVIKDVKKFLSETQSEIIILEIRTEFGHEDPPEFDKYLEEQLGEFLIPQDDHIFGKTIAELLPKRIICVWKPRKSPQPKAGSPLWSAGFLKDNWIDTDLPSTKFDGNLKHLSEHPPVTSRKYFYRVENTVTPVADNPVVCVKPVTRRIHGYARLFIAQCFAKGYADRLQVFSTDFIDEDFVDACVGLTHARIEGKA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02686 317 SMART plcx_3 50 192 IPR000909 -
Rops10g02686 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 80 173 IPR000909 -
Rops10g02686 317 CDD PI-PLCXDc_plant 32 312 - -
Rops10g02686 317 PANTHER UNCHARACTERIZED 28 310 - -
Rops10g02686 317 MobiDBLite consensus disorder prediction 9 26 - -
Rops10g02686 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 168 - -
Rops10g02686 317 MobiDBLite consensus disorder prediction 1 39 - -
Rops10g02686 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
Rops10g02686 317 SUPERFAMILY PLC-like phosphodiesterases 42 308 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02686 Rops-Chr10 46577219 46578468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02686 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 75.472 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02686 - - gmx:100805096 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02686 10 46577219 46578468 Rops10g02686 10 46577219 46578468 ECH