Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02667 ATGTCGTCTTCCTTCCGGACAGATTGGTCTCATCATCACAACGGAAATTCTAAAAATCCAGAGGCTCTAAGTAAGGTTGCAGAATTTGAGGAATTTGATTTCTCAAAAGCATTAGAAAGGCCAAAGGCTTTGAATATAGACAGACAGAGATCATGTGATGAGAGATCATTGAGTGAATTATCTATAGGCTTTTCTCCACGTTCCACAAAAGTTGAGAACTTTACTCGCCCTGGTGACCATCTTGACAATGCATATTCTCCTAGGCCAAAATCAGGTATTAATACACCAAGATCACAGACACTGGATCCACATCCATTAACACCTGAAGCTTGGGAAGCTCTGAGGCGTTCCTTGGTTTATTTTCGTGGTCAGCCAGTTGGGACAATTGCTGCCTTGGATAATTCAGATGAGAAACTTAATTATGATCAGGTGTTTGTAAGAGACTTTGTCCCAAGTGCTTTGGCTTTTCTGATGCATGGTGAACCAGAGATTGTTAAAAATTTTATCTTGAAGACCCTTCGCCTTCAATCATGGGAGAAAAAGATTGATAGGTTCCAGCTGGCAGAAGGGGTGATGCCTGCTAGTTTTAAGGTATTCCATGATCCAGTCAGAAACCATGAAACCCTGATAGCTGATTTTGGAGAAAGTGCAATAGGGAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATATTACTACGTGCATACACAAAAGCTACAGGAGACACTTCTTTGGCTGAAAGGCCTGAATGCCAAAAGGGTATGCGCTTGATTCTGGCTTTATGCCTGTCAGAGGGTTTTGACACCTTCCCAACGTTACTATGTGCTGATGGATGCTGTATGATTGATCGTAGAATGGATGTTTATGGGTATCCAATTGAAATTCAAGCATTGTTCTTCATGGCTTTAAGATGTGCCTTGCAATTGCTTAAGCAAGATGCTGAAGGGAAAGAGTTTATGGAACGAATTGTCAAACGTTTGCATGCCTTGAGCTATCACATGAGAAGCTACTTCTGGTTGGATTTGAAGCAACTTAATGATGTGTATCGCTTCAAAACAGAAGAGTACTCACATACTGCAGTGAACAAGTTTAATGTTATTCCTGATTCTCTGCCAGATTGGATTTTCGATTTCATGCCTCATCATGGTGGATACTTCATTGGGAATGTCAGCCCTGCTAGAATGGATTTCCGCTGGTTTTGCCTTGGTAATTGCATTGCAATTTTGTCCTGCATGGCAACTCCTGAGCAGTCCACTGCAATCATGGATCTCATAGAATCAAGATGGCAGGAATTGATTGGGGAGATGCCTGTCAAAGTTTGTTATCCAGCCATTGAAAACCATGAATGGGCCATCATAACAGGATGTGACCCAAAAAATACTAGATGGAGTTACCACAATGGGGGATCTTGGCCAGTTCTTTTATGGCTTCTGGCTGCGGCCTCCATCAAGACAGGGAGACCCCAAATTGCAAGACGTGCCCTTCACATTGCTGAGACCAGATTGCTAAAGGATAATTGGCCTGAATATTATGATGGAACGCTTGGTCGATACATTGGGAAGCAGGCACGTAAATGCCAAACTTGGTCAATTGCTGGTTACTTGGTGGCTAGGATGATGCTGGATGATCCATCACACCTAGGTCTTATAGCTCTGGAAGAAGACAAACAGCTAAAGCCTTTACTCAAAAGATCAAATTCATGGACTTTGTGA 1716 0.4242 MSSSFRTDWSHHHNGNSKNPEALSKVAEFEEFDFSKALERPKALNIDRQRSCDERSLSELSIGFSPRSTKVENFTRPGDHLDNAYSPRPKSGINTPRSQTLDPHPLTPEAWEALRRSLVYFRGQPVGTIAALDNSDEKLNYDQVFVRDFVPSALAFLMHGEPEIVKNFILKTLRLQSWEKKIDRFQLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKATGDTSLAERPECQKGMRLILALCLSEGFDTFPTLLCADGCCMIDRRMDVYGYPIEIQALFFMALRCALQLLKQDAEGKEFMERIVKRLHALSYHMRSYFWLDLKQLNDVYRFKTEEYSHTAVNKFNVIPDSLPDWIFDFMPHHGGYFIGNVSPARMDFRWFCLGNCIAILSCMATPEQSTAIMDLIESRWQELIGEMPVKVCYPAIENHEWAIITGCDPKNTRWSYHNGGSWPVLLWLLAAASIKTGRPQIARRALHIAETRLLKDNWPEYYDGTLGRYIGKQARKCQTWSIAGYLVARMMLDDPSHLGLIALEEDKQLKPLLKRSNSWTL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02667 571 MobiDBLite consensus disorder prediction 1 21 - -
Rops10g02667 571 Pfam Alkaline and neutral invertase 110 545 IPR024746 GO:0033926
Rops10g02667 571 FunFam probable alkaline/neutral invertase B 135 538 - -
Rops10g02667 571 PANTHER - 31 565 IPR024746 GO:0033926
Rops10g02667 571 MobiDBLite consensus disorder prediction 1 22 - -
Rops10g02667 571 SUPERFAMILY Six-hairpin glycosidases 111 538 IPR008928 GO:0005975
Rops10g02667 571 MobiDBLite consensus disorder prediction 69 103 - -
Rops10g02667 571 Gene3D - 137 538 IPR012341 GO:0005975
Rops10g02667 571 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02667 Rops-Chr10 46145548 46149231 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02667 - - lja:Lj1g3v3343910.1 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02667 10 46145548 46149231 Rops10g02667 10 46145548 46149231 ECH