Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02663 ATGGAGAGTACTAGTTCAGACAACACCAAGAGGAAAAGTGGAGGGAACGGAGAGGTTATGGATGGTTCCGGCATTATGGAGTTGGTTGGAAACGAGCAAGTGTTCAGCAACTTCGTGGACCACAAGTTTCATCAGTTGGATAAGGACAAAGATGGGAAGCTCTCTGTGAAGGAGCTAGAGCCTGCTGTGGCTGACATCGGTGCTGCTCTTGGTTTGCCTGCTCAGGGCACTAGTCCTGATTCTGATCACATCTATTATGAGGTCTTGAATGAATTCACCCATGGCAAGCAAGAAAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTCTCAGACATTCTATTAGGCATGGCTGCTGGATTTAAACGAGACCCAGTTGTTATACTCCGCATGGATGGGGAAGATCTCCTTGAGTTTGTTAATGGTCCAAGTTATGAAGCAGAAATGGCATCCATGTTCTCTGAGATTAAGAACCCTAGTGGATCACTTCGTGAATATATAATTGAAGCCTTTGGAAGACTCAATGTTGATCGAGGAATTCCTCCTACATCAGATTCTTGGGTTTTTAACAACATTGTGGAACCAGCACTGCTGTCTCAAGCTGGTCCTGCTTGGGATAAGCCTGTGACTCAAGAGACATTTTTGGAAGAATTTAAGAAAGTGGCATTTAGTGTGGTTGATTGTCTTAGAGAGAAACCTGTGATTGTTGCCCACAGTGAAAACACCTTTGATGGAGGTGGAGTCAAGAGACTTTTATCCAACAAGTTTGAATTAGACAAGACGTTGAACTCAGCTTTAGAGAATCTGCCTAAAGACCGAAATGGGAAAATATCAAAGGAGTGTCTGTGGGTGGCACTGGATGTGGTGTCTCCATCTGCTGGTTTACCTCCATTTGGTGCAATTGAAGAGTTGGATAAGGTTATTAATGAAGCCTTTAAGCTGGTGAATGCAGATGATACGAAGGAGGTTAAAGAAGAGGAATTCAAGAAAATTTTAACTGAAATACTGGGGAGTATCATGTTGCAGTTACAGGGCAATCCCATATCAGTTTCTTCAAATTCAGTTGTGCATGAGCCTTTAGGCTCATCTTCTACACTTTTGCAGCCATCTTCTGGTGAAACAGCATAA 1125 0.4302 MESTSSDNTKRKSGGNGEVMDGSGIMELVGNEQVFSNFVDHKFHQLDKDKDGKLSVKELEPAVADIGAALGLPAQGTSPDSDHIYYEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGFKRDPVVILRMDGEDLLEFVNGPSYEAEMASMFSEIKNPSGSLREYIIEAFGRLNVDRGIPPTSDSWVFNNIVEPALLSQAGPAWDKPVTQETFLEEFKKVAFSVVDCLREKPVIVAHSENTFDGGGVKRLLSNKFELDKTLNSALENLPKDRNGKISKECLWVALDVVSPSAGLPPFGAIEELDKVINEAFKLVNADDTKEVKEEEFKKILTEILGSIMLQLQGNPISVSSNSVVHEPLGSSSTLLQPSSGETA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02663 374 Gene3D - 37 342 - -
Rops10g02663 374 Pfam EF-hand domain pair 42 108 IPR002048 GO:0005509
Rops10g02663 374 SMART efh_1 306 334 IPR002048 GO:0005509
Rops10g02663 374 SMART efh_1 38 66 IPR002048 GO:0005509
Rops10g02663 374 MobiDBLite consensus disorder prediction 1 23 - -
Rops10g02663 374 ProSiteProfiles EF-hand calcium-binding domain profile. 302 337 IPR002048 GO:0005509
Rops10g02663 374 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Rops10g02663 374 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Rops10g02663 374 SUPERFAMILY EF-hand 42 345 IPR011992 -
Rops10g02663 374 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 18 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02663 Rops-Chr10 46083159 46090381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02663 18 373 EF-hand Containing Proteins AT4G38810 66.574 1.38e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02663 - - gmx:100787083 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02663 10 46083159 46090381 Rops10g02663 10 46083159 46090381 ECH