Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02649 ATGACCCCATTTCAGGGGCGTGGGTGGGTCCTCACAGACAAGGCAGTTGTTGGTTCAAGAATAAGGTGTATGGCAAATCCTAGGAGGGTGAAAATGGTGGCCAAGCAAATAAGGAGGGAGCTTTCTGACATGCTCGTCACCGATAAAGTGTTGCAGTATGCTGTTCTTCCCGAAGCTTCCTTAGGAGCTGACCGTTACCTCTCTTCCATCACCACCATCACCGACGTTGAAGTCTCCGCCGATTTGCAGGTGGTTAAGGTGTATGTATCTGTTTTTGGAGATGAAAGAGGGAAGGAAGTAGCCATTGCTGGGTTGAAGTCAAAGGCTAAATATGTTCGCAGTGAGTTGGGCAAGCGTATGAGGTTGCGCTTAACTCCTGAGATACGCTTTTTAGAGGATGAGTCCTTTGAGAGAGGAAGCAGGGTGATTGCAATATTAGATAAAATAAAAAATGAGAAGAGTGCAGACGGTCAAAACAAGGAGCAGTTGGATTCATCAACATATGACGATGATGATAATTGGGATGGTGAGGACCCTGACGAAGGTATCATTTATGTGGAATAG 564 0.4592 MTPFQGRGWVLTDKAVVGSRIRCMANPRRVKMVAKQIRRELSDMLVTDKVLQYAVLPEASLGADRYLSSITTITDVEVSADLQVVKVYVSVFGDERGKEVAIAGLKSKAKYVRSELGKRMRLRLTPEIRFLEDESFERGSRVIAILDKIKNEKSADGQNKEQLDSSTYDDDDNWDGEDPDEGIIYVE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02649 187 ProSitePatterns Ribosome-binding factor A signature. 112 133 IPR020053 GO:0006364
Rops10g02649 187 Gene3D - 24 140 IPR015946 -
Rops10g02649 187 FunFam probable ribosome-binding factor A, chloroplastic 24 140 - -
Rops10g02649 187 MobiDBLite consensus disorder prediction 168 187 - -
Rops10g02649 187 Pfam Ribosome-binding factor A 29 145 IPR000238 GO:0006364
Rops10g02649 187 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 18 187 IPR000238 GO:0006364
Rops10g02649 187 MobiDBLite consensus disorder prediction 153 187 - -
Rops10g02649 187 MobiDBLite consensus disorder prediction 153 167 - -
Rops10g02649 187 SUPERFAMILY Ribosome-binding factor A, RbfA 24 149 IPR023799 -
Rops10g02649 187 Hamap Ribosome-binding factor A [rbfA]. 28 146 IPR000238 GO:0006364
Rops10g02649 187 NCBIfam 30S ribosome-binding factor RbfA 24 151 IPR000238 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02649 K02834 - gmx:100812407 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02649 10 45910083 45912445 Rops10g02649 10 45910083 45912445 ECH