Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02633 ATGGAAGCTATCAGAAAGCAAGCTTCGAAGCTTCGAGAACAAGTCGCTCGCCAACAGCAGGCTGTGCTGAAACAGTTTGGGGCTGGGGGATATGGAGGTTCAGATAATATGGTTACTGATGAGATAGAGCTTCAGCAACATCAGAAACTAGAGAAGCTTTACATATCAACACGTGCAGGAAAGCATTATCAAAGGGATATTGTCCGTGGAGTAGAAGGTTACATTGTTACCGGATCCAAGCAAGTTGAAATAGGAACAAAGTTGTCAGAAGATAGCAGGAAGTATGGTGCAGAAAATACATGTACCAGTGGTAGTACGTTATCGAGGGCTGCACTAAATTATGCACGGGCCCGTGCACAAATGGAGAAGGAGCGTGGGAACTTACTAAAAGCTCTTGGCACACAGGTTGCAGAGCCTTTAAGAGCAATGGTGATGGGTGCTCCATTGGAGGATGCTCGGCATCTTGCTCAACGTTATGACAGAATACGACAGGACGCTGAAGCCCAGGCTATTGAAGTTTCCAAACGCCAGGCAAAAGTAAGAGAAACACCAGGCAATGCTGAAAATGCAATGAAACTGGAAGCAGCTGAAGCAAAGCTGCAAGACATGAAAACAAACATGGCCATGTTAGGAAAGGAAGCAGCTGCAGCAATGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTATGGTTGAATCAGAGCGTGCCTATCATCAAAGACTACTCCAAATACTTGATCAGCTTGAGGGAGAGATGATATCAGAACGACAACGTATTGAAGCCCCTCCAGCACCTAGTGTGGATAACAGCATGCCACCACCTCCATCATATGAAGAAGTGAACGGTGTCTATGCTTCTCAGGCACATAATGGCTCAACAGATAGTATGGGATACTTCTTAGGAGAGGTTTTATTTCCCTACCATGCTGAGTCTGAAGTTGAACTGAATCTATCAGTCGGGGATTATATTGTCATTCGAAAGGTGACAAACAATGGATGGGCTGAGGGTGAATGCAAAGGGAAAGCAGCTAGGTTCCTTCCAAGGTTCACGAGTTCACCTAGCAATGTTCACATGGGAATTGCCAAGAGGGTGCTGAAGTATGTTAGAGGTGCAACAAATCTCGCAATCTGGTATTTAAAGACAGAAGGAGTTAAGCAAATTGGCTATGCTGACAGTGATTGGACAGGAAGTGTTGATGACATGGAAAACACTTCAAGTTATGTATTTACAATTGATTCAGGTGTTATTTGTTGGAATGCAAAAATACAAGAAGTAGTGGCATAA 1302 0.4447 MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALNYARARAQMEKERGNLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRIRQDAEAQAIEVSKRQAKVRETPGNAENAMKLEAAEAKLQDMKTNMAMLGKEAAAAMAAVEAQQQRLTLQRLIAMVESERAYHQRLLQILDQLEGEMISERQRIEAPPAPSVDNSMPPPPSYEEVNGVYASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSVGDYIVIRKVTNNGWAEGECKGKAARFLPRFTSSPSNVHMGIAKRVLKYVRGATNLAIWYLKTEGVKQIGYADSDWTGSVDDMENTSSYVFTIDSGVICWNAKIQEVVA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02633 433 Coils Coil 149 169 - -
Rops10g02633 433 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
Rops10g02633 433 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Rops10g02633 433 Coils Coil 1 21 - -
Rops10g02633 433 Pfam SH3 domain 309 346 IPR001452 GO:0005515
Rops10g02633 433 Coils Coil 244 264 - -
Rops10g02633 433 Coils Coil 186 213 - -
Rops10g02633 433 PANTHER SH3 DOMAIN-CONTAINING 16 348 - -
Rops10g02633 433 Gene3D SH3 Domains 302 357 - -
Rops10g02633 433 SUPERFAMILY SH3-domain 264 348 IPR036028 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02633 Rops-Chr10 45628698 45640167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02633 - - gmx:100783004 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02633 10 45628698 45640167 Rops10g02633 10 45628698 45640167 ECH