Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02604 ATGCAATCTAGGAAAATAGCGGACGTGTTGAACGTCTCAGACGGTGGGTTAGCAGACAAGGAAAAGAACCTCACTACGAGCATCCATAACAATGGTCAACACGTGCAGAATGATTCTGGCTCTGCCCTCCAACAATATCTTGATCACATACCCATTAGTTCAATAGCCGGCATAAAAAATACACTCGTTTTGGAATTGAAAGCGGCAGAAACTATAAGGGATGCAATTCATGTGTTGTACGAAAAGGACACCTTTGCTGCAGCCATTGTGGATGTCTTAGACACGGATACAGCCAGCATAAGATTTTCAGATCGGTATATTGGTTTCATTGATTTTGCAAGCATTGTTCTTTGGTGTCTTGAGGAATATGAAAAGATCAGGGGAAATGCCCCGGAATACTATCTCAAGGATATAGAGAACGATGGCTTTTTCTCCATCCTGGACCAGATTCCTCAGATCGGGCAAACTAAGGTTGGCGAGTTGGCTACTAAGTCTTTCTTCTGGGAACCATTTTTCCCTGTACGCTTGGATGACACAATTTTGCATGCATTGTTACTTCTTTCTAAGCATCGTCTGCACTTTTTGCCGGTCATACAGCAACCTGATGCTGGAATCATCGGTTTTGTCCCCGAGAATGCGGTAGTCCAACTCCTCCTTCAATCAAGCGAACTAGAGTGGTTTGATAATATTGCTAACAAGAACTTGTCAGATTTCCGATTTGAAGGCCAAGAACATCCTAGTTGTGTATCTAGGAACCAAACTGTTGCAGATGCTCTGAAGTTGCTCTGGCAGAACCAAACTCATGCAGTTGCAGTTGTAGATGGACAAACTAAGAAGCTCCTGGGTAATGTGAGGAACAGTGATGTTTATAATCTTGTAAAGAATGATGACCTCTTTAGAAATAGAACGATTTTAACTGTCGAAGAATTCATTCATATAGAGACTGAGAAAGTTGACACTGAACCAACCATTGAACATGACCACGGGGCTTTTCTCACAGCAAGAAGTCTCCGCCTTAAAAACAGCTTCACACCCAGCATGGATTCACCAGTTACCAGCAAGGAAAATGAGACGCTCAAGCAAATAATGGAGCATATGACACAAACTAATAGCAGTTTCAGCTTTCTGATCAATGATAATGAACAAGTTACAGGTTTGCTCACACTGAGAGATATAATTCTGCAATTTGCACCACCTGGTGTGAATTCTAGAATTGATGGGGGTGGGTTTTTTGAGTTTGCTTTGGAACAGAGTGGATGTCAAGTGAAAAATGGAACTATGATTCGTAATCATTGA 1296 0.4182 MQSRKIADVLNVSDGGLADKEKNLTTSIHNNGQHVQNDSGSALQQYLDHIPISSIAGIKNTLVLELKAAETIRDAIHVLYEKDTFAAAIVDVLDTDTASIRFSDRYIGFIDFASIVLWCLEEYEKIRGNAPEYYLKDIENDGFFSILDQIPQIGQTKVGELATKSFFWEPFFPVRLDDTILHALLLLSKHRLHFLPVIQQPDAGIIGFVPENAVVQLLLQSSELEWFDNIANKNLSDFRFEGQEHPSCVSRNQTVADALKLLWQNQTHAVAVVDGQTKKLLGNVRNSDVYNLVKNDDLFRNRTILTVEEFIHIETEKVDTEPTIEHDHGAFLTARSLRLKNSFTPSMDSPVTSKENETLKQIMEHMTQTNSSFSFLINDNEQVTGLLTLRDIILQFAPPGVNSRIDGGGFFEFALEQSGCQVKNGTMIRNH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02604 431 SMART cbs_1 170 219 IPR000644 -
Rops10g02604 431 SMART cbs_1 245 294 IPR000644 -
Rops10g02604 431 SMART cbs_1 349 397 IPR000644 -
Rops10g02604 431 Gene3D - 228 397 IPR046342 -
Rops10g02604 431 ProSiteProfiles CBS domain profile. 162 224 IPR000644 -
Rops10g02604 431 ProSiteProfiles CBS domain profile. 242 299 IPR000644 -
Rops10g02604 431 SUPERFAMILY CBS-domain pair 244 395 IPR046342 -
Rops10g02604 431 CDD CBS_pair_SF 169 289 - -
Rops10g02604 431 Gene3D - 33 224 IPR046342 -
Rops10g02604 431 CDD CBS_pair_SF 244 393 - -
Rops10g02604 431 ProSiteProfiles CBS domain profile. 343 404 IPR000644 -
Rops10g02604 431 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 51 396 - -
Rops10g02604 431 Pfam CBS domain 166 218 IPR000644 -
Rops10g02604 431 Pfam CBS domain 349 393 IPR000644 -
Rops10g02604 431 SUPERFAMILY CBS-domain pair 43 210 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02604 Rops-Chr10 45183493 45185531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02604 - - gmx:100819351 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02604 10 45183493 45185531 Rops10g02604 10 45183493 45185531 ECH