Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02555 ATGTTTTCTGAAAGATTGGGGGCAGATGAATCTCCTTGTCAAGATTTGCACAGTTTGAGTGTGTCAAAGCGTCTTGTGAGGAGTGTCAGCCAGAAGTTGAGGAAGAAGAATAACAGACGTGCAGCGGAAGAAGATGATGATGTAAATGGAGTTTCTTTAAGATGTCTAAACCTGTATGCTCGAGGTGGAGGCTGCAAGGTAGGTGCTGACACTAGTGATGACTTTGGTGATTCAAGCAGTAGAAGGAGATCTAGTGCCAGTGAAGAAGGCAAGGGATATAAACCAATTTGTGGCCCTGAAGAAACCGCTGTGGATTGCTTCTCATATGGGGTGAGGGACATTCTTTGGAGGAGACACAACAGAAAGAATTCTGAGCTTGAAGAATTGATAACAAACAACAGAATGCATATCTTTCTTCCAGATGATATTCTTGAAATGTGTTTGGTTAGGCTTCCATTGACAAGTCTCATGAATGCCCGCCTTGTTTGCAAAAAATGGCGGTCCTTAACCACCACCCCTAGATTCCTCCAAATGAGAAGAGAGGGTTCATATCATAGTCCATGGTTGTTTCTGTTTGGTGCCGTTAAAGATGGCTTTTGCTCTGGTGAGATACATGCATTGGATGTGTCTTTGAATCAATGGCATAGGATGGATGCTAGTTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTAGTATACAGGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACAAACTTTGGGAAAGTGGATAGGAGCTCTTTCAAAACACACAAAGGGGTGCTTGTATTTAGTCCCTTGACAAAATCTTGGCGTAAAATACCATCTATGAAATATGCTAGATCAATTCCTATATTAGGAGTCTCTGAGGTCAGTTTGGATTTTCCAACTTGTCAAAGTCATCAAAGTCGGCAGGATAGACGTTTCCCAAGATCAAGGATTGGTGGGGTTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAATGAGACGTCATTGCAGAGCTACTTTGAATGAGACCGAAGCCTCATCTTTACCCAGTAGAAAGGCATACAAATTCCTGAGACAAAGAAGTGATCATTCAAACTCGAAGGGTAGTAGAAGATTTTTGTTGATAGCTGTAGGAGGTCTGGGATCTTGGGATGAGCCTCTGGACTGTGGGGAAATATATGATTCTGTTTCAAATAAATGGACTGAAATCCCAAGATTGCCTTTTGATTTTGGGATTTCTTGTTCTGGAACTGTTTGTGGAAGGATGTTTTATGTTTATTCTGAGACAGACAAGCTTGCAGCATATGACATAGAACGAGGTTTCTGGATTGCAATTCAAGTCACTCCGATCCCACCTCGTGTACACGAGTACTATCCGAAACTTGTATCTTCAAATGGCCGTCTTTTCATGCTCTCAGTGTCTTGGTGCGAAGGGGATGGTCAAATTGGGCGAAGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATGTATCTTACCTGGACTGAAGTCTCAGTGCATCCTGATGCCCCAATGGACTGGAATGCTGCTTTTGTGGCAGACAAAAACCTGATTTTTGGGGTAGAGATGTTCAAAATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGATGTGTCTGATATGGTAAACTGGAGCCATATTTCAAGGAATCATGTTACTCATGAGCTGGATGGTTCTTCATGCTTGACCAAAACCTTGGCTGTGCTACACCTTTGA 1740 0.4207 MFSERLGADESPCQDLHSLSVSKRLVRSVSQKLRKKNNRRAAEEDDDVNGVSLRCLNLYARGGGCKVGADTSDDFGDSSSRRRSSASEEGKGYKPICGPEETAVDCFSYGVRDILWRRHNRKNSELEELITNNRMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQMRREGSYHSPWLFLFGAVKDGFCSGEIHALDVSLNQWHRMDASFLRGRFLFSVASIQDDIFIVGGCSSLTNFGKVDRSSFKTHKGVLVFSPLTKSWRKIPSMKYARSIPILGVSEVSLDFPTCQSHQSRQDRRFPRSRIGGVSDVYEDPHKLSMRRHCRATLNETEASSLPSRKAYKFLRQRSDHSNSKGSRRFLLIAVGGLGSWDEPLDCGEIYDSVSNKWTEIPRLPFDFGISCSGTVCGRMFYVYSETDKLAAYDIERGFWIAIQVTPIPPRVHEYYPKLVSSNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAAFVADKNLIFGVEMFKIFGQVLDFFTVCDVSDMVNWSHISRNHVTHELDGSSCLTKTLAVLHL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02555 579 MobiDBLite consensus disorder prediction 73 94 - -
Rops10g02555 579 CDD F-box_AtFBW1-like 138 175 - -
Rops10g02555 579 FunFam F-box/kelch-repeat protein isoform A 337 564 - -
Rops10g02555 579 SUPERFAMILY F-box domain 139 201 IPR036047 GO:0005515
Rops10g02555 579 Pfam F-box domain 139 175 IPR001810 GO:0005515
Rops10g02555 579 Gene3D - 151 295 IPR015915 GO:0005515
Rops10g02555 579 SMART fbox_2 139 179 IPR001810 GO:0005515
Rops10g02555 579 Gene3D - 333 564 IPR015915 GO:0005515
Rops10g02555 579 PANTHER OS09G0555300 PROTEIN 1 579 - -
Rops10g02555 579 ProSiteProfiles F-box domain profile. 133 179 IPR001810 GO:0005515
Rops10g02555 579 Pfam Kelch motif 373 406 IPR006652 GO:0005515
Rops10g02555 579 MobiDBLite consensus disorder prediction 75 89 - -
Rops10g02555 579 FunFam F-box/kelch-repeat protein isoform A 152 300 - -
Rops10g02555 579 Pfam Kelch motif 227 283 - -
Rops10g02555 579 SUPERFAMILY Kelch motif 187 527 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02555 Rops-Chr10 44465775 44468710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02555 - - gmx:100813797 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02555 10 44465775 44468710 Rops10g02555 10 44465775 44468710 ECH