Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02548 ATGACCAACACCATGATAGAAGAAGAGAGCAAGAAAGTGGTGGAGGAGAAAAAAGAAGTGATACCCCTTCTCACCCCATTCAAGATGGGAAATTTTAATCTATCCCACAGGATAGTTCTGGCACCGTTAACAAGAACGAGGTCTTACAACTTTGTGGCTCAGCCTCATGCTGCTGTCTATTATTCTCAACGAACAACAAAGGGTGGCTTCTTGATCGGGGAAGCATCAGGTGTGTCAAACACTGCACAGGGGTACCCAAATACACCTGGCATTTGGACAAGAGAACAGGTGGAAGCATGGAAACCCATTGTGAGAGCCGTTCATGAGAAAGGGGGCATATTCTTTTGTCAACTTTGGCATGCTGGAAGAGTATCCAACTACGGTTACCAACCAGGTGCGCAGCCACCGATTTCAAGCACTGACAAGCCAATTAAAAAGGAAGGTAGCAGCACTAAATACCCACCTCCTCGCCCTCTCAGAACCGATGAGATTCCAAACGTTGTCAATGACTTCAGAATGGCAGCCAAAAATGCCATAGAAGCAGGTTTTGATGGAGTGGAGATACATGGAGCAAATGGATACCTGCTTGATCAGTTCCTTAAGGACAAGGTCAATGACAGAGATGATGAGTATGGAGGTAGCTTAGAAAATCGTTGTCGCTTCCCATTGAAGGTGGTGAAGGCTGTGGCTGATGAGATAGGATATGACAAAGTTGGTGTTAGGCTCTCCCCTTTCGCTGATTACTGTGATTGTCGAGATTCTGACCCTCAAGCATTGGGGATTTACATGGCTCATTCCTTGAGTCAATTGGGTATTCTCTATTGTCATGTCATTGAACCAAGGATGTGTACAATGTTTGAAAGGTGTGAGACCAACGTGTCCCTCTTGCCCATGAGAAAGGCCTTCAAAGGAACCTTTATTGTTGTTGGTGGATATAACAGGAGTGAAGGAAATCAAGTAATAGCTAACGGTGGTGCAGATTTGGTGGCTTATGGAAGGCCGTTTTTGGCAAATCCAGATCTGCCTAGAAGATTTGAACTGGATGCTGAGTTAAACATTGCTGATAGACGCACTTTTTACACCAGTGACCCTGTTGTTGGATATACGGATTATCCATTTCTTGATAACAACAGCTAG 1137 0.4477 MTNTMIEEESKKVVEEKKEVIPLLTPFKMGNFNLSHRIVLAPLTRTRSYNFVAQPHAAVYYSQRTTKGGFLIGEASGVSNTAQGYPNTPGIWTREQVEAWKPIVRAVHEKGGIFFCQLWHAGRVSNYGYQPGAQPPISSTDKPIKKEGSSTKYPPPRPLRTDEIPNVVNDFRMAAKNAIEAGFDGVEIHGANGYLLDQFLKDKVNDRDDEYGGSLENRCRFPLKVVKAVADEIGYDKVGVRLSPFADYCDCRDSDPQALGIYMAHSLSQLGILYCHVIEPRMCTMFERCETNVSLLPMRKAFKGTFIVVGGYNRSEGNQVIANGGADLVAYGRPFLANPDLPRRFELDAELNIADRRTFYTSDPVVGYTDYPFLDNNS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02548 378 MobiDBLite consensus disorder prediction 132 162 - -
Rops10g02548 378 CDD OYE_like_FMN 22 356 - -
Rops10g02548 378 Pfam NADH:flavin oxidoreductase / NADH oxidase family 23 349 IPR001155 GO:0010181|GO:0016491
Rops10g02548 378 FunFam 12-oxophytodienoate reductase 3 16 378 - -
Rops10g02548 378 SUPERFAMILY FMN-linked oxidoreductases 22 374 - -
Rops10g02548 378 Gene3D Aldolase class I 9 378 IPR013785 -
Rops10g02548 378 PANTHER NADH OXIDOREDUCTASE-RELATED 18 374 IPR045247 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02548 Rops-Chr10 44361575 44366618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02548 13 378 Acyl Lipid Metabolism Gene Families AT1G76690 66.846 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02548 K05894 - gmx:100790284 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02548 10 44361575 44366618 Rops10g02548 10 44361575 44366618 ECH