Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02546 ATGGGCGAGGTATCTGAAACCATGACGAAGAAGAAGAAGAAGGGACGCCCATCTCTTTTGGATCTTCAAAAGCGATCTCTCAAACAACAACAACAACAACAACAACATAACATCAATTCAATCAATTTGTATTCAAACGTTGTTCCACAAGATTGCGATGACGACGACGAGCGCAAAGAGAAGAAGCACAAGCTCTTGATTGGTTTGAATCCCCATCTCCAACACTCAACATTATTGCCCAATTCCTTGTCATTGAAATCCGTTCCTCACGACGATCCCGATGCCACTCATAAGAGACGCAAGATTGACCACGGATCAGATGATACGGATGGAAAGGTTCCGAAAGCGACAGAGGATAAACATGGTTCGCAGGGAGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAAAAGGACACACATAGGGTATTCTCTGAGCCCGTGGATCCAGAAGAGCTTCCTGATTATCATGATATCATTAAACACCCGATGGATTATGGAACTGTGAGGAAAAAATTGGATGGGGGACTATATACCAGCTTAGAACAATTTGAGAGCGATGTCTTCTTGATATGCTCTAATGCGATGCAATACAATTCACCAGATACTATTTACTATAGACAGGCCCGGACCATGCAAGAGATGGCAAGGAAGGACTTCGAGAATCTGAGACAAGATAGTGATGATAGTGAACCACAACCCAAAATTGTGCACAGAGGAAGGCCACCAGGCAAGCATGCAAAAAAGTCACAGGGTATGTCTCCTTCAGAGCGTGTTGGTCCTGAATCTTCTTCCGATGCAACTCTTGCTTCTGGTGGGGATATTGCTAGTGGCTCCAATGGTTATAACCTGAGAAAAGGACTTGGCAAATTTCAGCCTGCAGAATCATCAGCCAGGGCCTCCCATGGCAATTTTAACAGTGGAGGTTACACTAGTTGGTTGCCTGAATGGGAGAATGAGTTTCCAGCTTCTGTTATAAAAGCTGTGCTAAGGTATGGAAATAAGCAGTTTATGGTTGATGAGACCAGGCGAGACACTTACAAAAATCCAGTGGCTTTAGGAAATGAACAACCAGTATTGGCCCCATATGGAGATGATTTCAAGCAACTTCTTGCGGTAGGTTTACATGTGAAGCATAGCTATGCAAGAAGCCTAGCCCATTTTGCTGCAGATCTTGGCCCTATTGTCTGGAAGATTGCTGCGAGGAAAATCCGCAGTGTCTTGCCATCAGGACATGAATTTGGCCCTGGATGGGTAGGTGAAGATGACATGTCACAGAGGCAACACTTCCAAGTTTGTGATGAGGAGAGAAATTCAGACCCTCCCGTGCCAGAGGATTATAGAAGTAGATTTTCTTCTCCATCTGGATCGTTCCCTCTTGCAAATACATCATGCTTGCAAGGTGGAGACATGGTAACAAATAGAGAATTGAATTACCAAAATGAATTGAATCCAGTCAGCAGTGCTGGTGGTGAGAGTGAATCCATGATTCCTGGGAGGATTCAGCAGGAATCCGTGGTGCAATCTGATGATTTTGGTTCTAATGGTCGGTTAGGTTCTAATTTTTCACCTCAAATGAAGATGGTAAGACTTGCTGACTTAACTGGATCATCGAGTGCTGGGAATGTTCCTCAAACGTTTGACATAAGCAACCGCATTGTGCCTACAAATGTTAATCCAGCTATCAAGGCCCAGTTCTTAAACAAGTCTAGTCAATTAGATTCCAGTAATTTATTAGTCCGGGAATCTGGATTTGAGTCACAAAGTTTGTCTCAAGTGCTTGCTGGAAAATCACCTTGGCAGGGATTTGAAGTTCCTACTAAGCAGAATTCTTTTCCACTTGCTAATGACTTAAATGGGAAGATAGGGGCAACGAATTCACCTGGTTCCAATGTGGATAGTGGTTCTCAACTGCATCCAAATCTGACTTTGCAGCTCGGATGA 1977 0.439 MGEVSETMTKKKKKGRPSLLDLQKRSLKQQQQQQQHNINSINLYSNVVPQDCDDDDERKEKKHKLLIGLNPHLQHSTLLPNSLSLKSVPHDDPDATHKRRKIDHGSDDTDGKVPKATEDKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHRVFSEPVDPEELPDYHDIIKHPMDYGTVRKKLDGGLYTSLEQFESDVFLICSNAMQYNSPDTIYYRQARTMQEMARKDFENLRQDSDDSEPQPKIVHRGRPPGKHAKKSQGMSPSERVGPESSSDATLASGGDIASGSNGYNLRKGLGKFQPAESSARASHGNFNSGGYTSWLPEWENEFPASVIKAVLRYGNKQFMVDETRRDTYKNPVALGNEQPVLAPYGDDFKQLLAVGLHVKHSYARSLAHFAADLGPIVWKIAARKIRSVLPSGHEFGPGWVGEDDMSQRQHFQVCDEERNSDPPVPEDYRSRFSSPSGSFPLANTSCLQGGDMVTNRELNYQNELNPVSSAGGESESMIPGRIQQESVVQSDDFGSNGRLGSNFSPQMKMVRLADLTGSSSAGNVPQTFDISNRIVPTNVNPAIKAQFLNKSSQLDSSNLLVRESGFESQSLSQVLAGKSPWQGFEVPTKQNSFPLANDLNGKIGATNSPGSNVDSGSQLHPNLTLQLG* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02546 658 MobiDBLite consensus disorder prediction 78 134 - -
Rops10g02546 658 MobiDBLite consensus disorder prediction 429 466 - -
Rops10g02546 658 ProSitePatterns Bromodomain signature. 152 209 IPR018359 -
Rops10g02546 658 ProSiteProfiles Bromodomain profile. 147 217 IPR001487 GO:0005515
Rops10g02546 658 SMART bromo_6 128 236 IPR001487 GO:0005515
Rops10g02546 658 MobiDBLite consensus disorder prediction 233 249 - -
Rops10g02546 658 MobiDBLite consensus disorder prediction 267 287 - -
Rops10g02546 658 Pfam Bromodomain 142 221 IPR001487 GO:0005515
Rops10g02546 658 CDD Bromodomain 135 231 - -
Rops10g02546 658 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 652 - -
Rops10g02546 658 MobiDBLite consensus disorder prediction 438 455 - -
Rops10g02546 658 MobiDBLite consensus disorder prediction 625 658 - -
Rops10g02546 658 MobiDBLite consensus disorder prediction 233 287 - -
Rops10g02546 658 Gene3D - 133 249 IPR036427 GO:0005515
Rops10g02546 658 MobiDBLite consensus disorder prediction 90 122 - -
Rops10g02546 658 SUPERFAMILY Bromodomain 123 239 IPR036427 GO:0005515
Rops10g02546 658 PRINTS Bromodomain signature 180 198 IPR001487 GO:0005515
Rops10g02546 658 PRINTS Bromodomain signature 150 163 IPR001487 GO:0005515
Rops10g02546 658 PRINTS Bromodomain signature 198 217 IPR001487 GO:0005515
Rops10g02546 658 PRINTS Bromodomain signature 164 180 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02546 Rops-Chr10 44332556 44337096 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02546 K22184 - gmx:100811115 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02546 10 44332556 44337096 Rops10g02546 10 44332556 44337096 ECH