Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02520 ATGGAGGAAGTGGTGGAAATCAAGATAAGTACTATACCGAGAGAGACACATAACTCACCAGCACAACTTCAAGTTCATCATCAGTTACATTCTCCTTCAATGAACTTAACCGATTCAATTACCAAAAGCCCTTTTGCATCTCGTTTTATGAACACTCCCTTAGCTAGCCCCATGAAGAAGGCCATTGAAAACATGCAAGGTTATCTAGAAGAAGTTGGGCGCTTCACCAAGCTTGACCCACAAGATAATTGGCTTCCTATCACTGAGTCAAGGAAGGGAAACGCTTACTATGCTGCGTTTCATGTGCTTAGTTCCGGGATTGGATTTCAAGCCCTTGTTCTTCCCTTGGCCTTCACCACTCTTGGCTGGACTTGGGGAATCTTGTGTCTGTGTGTGGGTTTCACATGGCAGCTATACACGTTGTGGTTACTGGTTCAGCTTCATGAATCGGACTCAGGGGTACGCCACAGCAGGTACCTCAGACTTGCTATGGCAGCATTTGGAGAAAAGCTAGGGAAACTACTGGTACTCTTCCCAGTTCAATATTTATCTGGTGGGACTTGTGTGACACTGATCATGATTGGAGGTGGCACAATGAAGATATTCTTTCAGATTATGTGTGGAGAGTCATGCAGCCTTTATCCACTCACAACCATAGAGTGGTATTTGGTGTTTACTGGGGCAGCCATTTTGCTTGCTCAGCTTCCAAACCTGAATTCAATAGCTGGGGTTTCTCTTATTGGAGCCATCACAGCTGTTGGTTATTGTGCTTTGATATGGATTGTGTCTGTAGTCCAAGGCAGACTTCCTCATGTATCCTATGAGGCACCACAATCTGAGGTCACTAGGATTTTTAGCCTGTGGAATGCACTCGGCATCATTGCTTTTGCTTTCAGAGGTCATAATCTTGTGCTGGAAATACAGGGAACCATGCGTTCGGATGCCCAGCAACCCTCACACGTGGCTATGTGGAAAGGTGTTATGTTTGCTTATCTAGTCATCGCCTTTTGTTTGTTTCCCCTAGCCATAGGAGGCTATTGGGTCTATGGAAATTCAATTCCTTCCAACGGAGGGATGCTAAGTGCTTTGCACAGATATCATGAACATGATACATCAAAGTCCATCATCGCTTTGACAAGCTTGCTACTCGTCATCAACAGCATCAGTTCCTTCCAAATCTATGCAATGCCAATATTTGACAACCTGGAATTCAGATACACGAGCAAGAAGAATAAACCTTGCCCGAGGTGGCTACGAATAACCTTCAGAAGTCTCTTTGGATTTCTAGCATTTTTTATTGCCATAGCATTACCGTTCTTGCCAAGTTTGGCAGGCCTAATTGGAGGTATTGCTCTACCAATAACCTTAGCTTATCCCTGTTTCATGTGGATAGAGATAAAGAAACCAAAGAAATATAGCACATCCTGGTACCTAAACTGGACGCTCGGAGTCGTTGGGATGATTCTAAGTGTTCTGGTTGTCATAGGAGCCATTTGGGGCATAGTTGCTCTGGGCATAAAGATCAATTTCTTCAAACCATAG 1542 0.4416 MEEVVEIKISTIPRETHNSPAQLQVHHQLHSPSMNLTDSITKSPFASRFMNTPLASPMKKAIENMQGYLEEVGRFTKLDPQDNWLPITESRKGNAYYAAFHVLSSGIGFQALVLPLAFTTLGWTWGILCLCVGFTWQLYTLWLLVQLHESDSGVRHSRYLRLAMAAFGEKLGKLLVLFPVQYLSGGTCVTLIMIGGGTMKIFFQIMCGESCSLYPLTTIEWYLVFTGAAILLAQLPNLNSIAGVSLIGAITAVGYCALIWIVSVVQGRLPHVSYEAPQSEVTRIFSLWNALGIIAFAFRGHNLVLEIQGTMRSDAQQPSHVAMWKGVMFAYLVIAFCLFPLAIGGYWVYGNSIPSNGGMLSALHRYHEHDTSKSIIALTSLLLVINSISSFQIYAMPIFDNLEFRYTSKKNKPCPRWLRITFRSLFGFLAFFIAIALPFLPSLAGLIGGIALPITLAYPCFMWIEIKKPKKYSTSWYLNWTLGVVGMILSVLVVIGAIWGIVALGIKINFFKP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02520 513 PANTHER OS05G0424000 PROTEIN-RELATED 95 498 - -
Rops10g02520 513 Pfam Transmembrane amino acid transporter protein 92 502 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02520 Rops-Chr10 44006795 44010894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02520 1 513 Organic Solute Cotransporters AT1G47670 55.985 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02520 K26385 - gmx:100788860 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02520 10 44006795 44010894 Rops10g02520 10 44006795 44010894 ECH