Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02506 ATGAGTACGAGAATTATGGATAAATTGTATGGGTTGAGCCATCTGTTCGTGATGGTCTTTCTTCATAACTTCTCTACATTCATGGTGCACCCAGCCATCACCGATGTCACAATGGCTGCGCTCTGTCCTGGACAAGATGAATGCTCAGTTGCTATCTACCTCACTGGTTTTCAACAAGCGATGATAGGACTGGGAACGCTTGTGATGATGCCACTCTTGGGTAATCTCTCAGATAAGTATGGGAGGAAAGCCATCATGACAGTCCCAATGAGCCTCGCAATTATTCCCTTAGGCATATTGGCTTACAGCAGGACGAGAAAATTCTTCTACGTGTATTACGTGTTTAAGACTCTCATTTCCATGATTTTCGATGGAAGCGTTCCTTGCCTCGCTCTAGCTTACGTGGCAGATAACGTTCCAGAAGGTGGACGAGGCACTGCGTTTGGAGTTATTTCAGGGATAGGATCCGCCGCGTTCGTGTGCGGCACCTTATCAGCTCGATTCCTGTCTACTGCTCTAACTTTCCAGGTATCCACTATTGTCGCGGTGATCGGAGCGGTGTATATGATAATTTTCCTTCCGGATTCGGTCATCCATGACAACAACCATCTTTATACCCCAATCATTTCCGAGGGAACGCCCGTTACTGCTAAAATCGATGGAAAATCCAAAAGCAAAATGCATCTGTTGGAAGCATTGCGTTCTTTGCAGGACCTATCCTCCTTCCTCAACAGTAGCTTGACTATTACCCAAGCAGCAATTGTTGCATTCTTCAGCAACCTTGCAGATGTAGGCCTTCACGGTTCAATGATGTATTACTTAAAGGCTCAGTTTCATTTTGACAAGAATCAGTTTGCTGATTTGATGGTCATTTCTGGGGTTGCAGGGACAGTGTCGCAGCTTCTTCTTATGCCCGTTTTGGCTCCTATTATGGGTGAGGCAAGGCTGCTATCAGTTGGACTATTTTTTCACTGTGTACATATGTTCATTTACAGCATAGCATGGTCCCCCTTGGTTCCTTATGCTGCTGCAATGTTCTCAATTTTGTTTGTTTTCTCACAACCCTGTATACGGAGTATTGTGTCTAAACAAGTTGGTCCCCATGAGCAGGGAAGGGCTCAAGGTTGCATCTCAGGCATATGTTCAGTTGCGCAAATTGTCTCTCCCTTGGCTTTCTCTCCATTAACGGCTCTCTTCCTGTCTGAAAGGGCACCTTTTAATTTCCCTGGCTTCAGTATAATGTGTATTGGACTAGCTTCGATGGTATCTTTTGTTCAGAGTACGATGCTTAGAGTGGTTCCTCCCATTTTGAGTTAA 1317 0.4503 MSTRIMDKLYGLSHLFVMVFLHNFSTFMVHPAITDVTMAALCPGQDECSVAIYLTGFQQAMIGLGTLVMMPLLGNLSDKYGRKAIMTVPMSLAIIPLGILAYSRTRKFFYVYYVFKTLISMIFDGSVPCLALAYVADNVPEGGRGTAFGVISGIGSAAFVCGTLSARFLSTALTFQVSTIVAVIGAVYMIIFLPDSVIHDNNHLYTPIISEGTPVTAKIDGKSKSKMHLLEALRSLQDLSSFLNSSLTITQAAIVAFFSNLADVGLHGSMMYYLKAQFHFDKNQFADLMVISGVAGTVSQLLLMPVLAPIMGEARLLSVGLFFHCVHMFIYSIAWSPLVPYAAAMFSILFVFSQPCIRSIVSKQVGPHEQGRAQGCISGICSVAQIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGLASMVSFVQSTMLRVVPPILS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02506 438 ProSiteProfiles Major facilitator superfamily (MFS) profile. 11 438 IPR020846 GO:0022857
Rops10g02506 438 SUPERFAMILY MFS general substrate transporter 15 422 IPR036259 -
Rops10g02506 438 Gene3D MFS general substrate transporter like domains 12 427 IPR036259 -
Rops10g02506 438 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 12 423 - -
Rops10g02506 438 CDD MFS_SLC46_TetA_like 15 427 - -
Rops10g02506 438 Pfam Major Facilitator Superfamily 15 389 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02506 Rops-Chr10 43720076 43730161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02506 7 434 Organic Solute Cotransporters AT2G16990 43.973 3.92e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02506 - - gmx:100789917 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02506 10 43720076 43730161 Rops10g02506 10 43720076 43730161 ECH