Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02501 ATGCCCTCATTAGAAGCATCACATACAACTTGTAAAGGAAAAAATTGCAAAAGTAATGGTCTTGATGTAAAGAAGATGATGGAGAAGCAATTTATGGACCTTTTCACAGAGGGTTTTGAAGCGGATTCAATTAAACGCTATTTCAAGCACATGGCGAAAGGAAAGTATATGCATACACGAATACAGGGGAAGAAAAGGTCGACGGTTACGCTGGTTCTGTGGACCCTTTTAATGTTCACACTAGTGCTTCTCGTGCTCCTTGCACTTGGAATTGTCTATCTTCCAACTACCAACGACGATTCTCCAACCATGGATCTCAGTGCCTTCAGGCGCAAAACCTCTGAAAGTGGTGACAGTTCGGTAGAGAGGCAGAAGCAATGGACCGAAATTCTCTCCTGGGAGCCAAGAGCTTTCATTTATCACAATTTTCTGTCAAAAGAAGAATGTGAATACTTGATCAATCTTGCCAAACCTTATATGGAAAAATCCAGTGTTGTTGATAGCAAGACCGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTCTGAAGAGAGAAAGGGATAAAATTATCCAGAAGATAGAAAAAAGAATTGCCGACTTTACCTTCATACCAGTAGAGAATGGAGAAGGACTTCAGGTTCTTCATTATGAAGTGGGGCAGAAATATGAGCCTCACTATGATTACTTCCTTGATGAGTTCAACACTAAGAACGGAGGCCAACGTATTGCTACTGTTCTGATGTACCTTTCAGATGTTGAAGAAGGTGGTGAGACCGTATTTCCTGCTGCCAAGGCTAACTTTAGTTCTGTGCCATGGTGGAATGATTTATCCGAATGTGCTAGAAAGGGTCTGTCGGTGAAACCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGACCAGATGCCACATTAGATCCATCTAGTTTACATGGAGGTTGCCCAGTAATTAGAGGTAATAAATGGTCTTCGACAAAGTGGATGCATCTTGAGGAGTACAAAGTTTGA 1020 0.4176 MPSLEASHTTCKGKNCKSNGLDVKKMMEKQFMDLFTEGFEADSIKRYFKHMAKGKYMHTRIQGKKRSTVTLVLWTLLMFTLVLLVLLALGIVYLPTTNDDSPTMDLSAFRRKTSESGDSSVERQKQWTEILSWEPRAFIYHNFLSKEECEYLINLAKPYMEKSSVVDSKTGKSTESRVRTSSGMFLKRERDKIIQKIEKRIADFTFIPVENGEGLQVLHYEVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSSTKWMHLEEYKV* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02501 339 SMART p4hc 135 333 IPR006620 GO:0005506|GO:0016705|GO:0031418
Rops10g02501 339 Gene3D q2cbj1_9rhob like domain 128 334 - -
Rops10g02501 339 FunFam Prolyl 4-hydroxylase 4 127 334 - -
Rops10g02501 339 Pfam 2OG-Fe(II) oxygenase superfamily 215 333 IPR044862 -
Rops10g02501 339 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 107 334 IPR045054 -
Rops10g02501 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 211 334 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02501 Rops-Chr10 43657279 43666512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02501 K00472 - gmx:100818586 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02501 10 43657279 43666512 Rops10g02501 10 43657279 43666512 ECH