Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02499 ATGATGAGGACGGAGATGAAGGATGGAACTCAAGCTCTGGTGATTAATAATGGTAACTCCGGGGAAGTTTCAAGCTCTAAGTTATCAAATCTGCTGGCTTCCAAAGATCGTGATTTTCTGCTCTCTTCTACAACAGGGGCTCAGGTAAAAGTTTCTGATCTTGAAGGGAAAGTAGTGGGTCTTCTATTCGCTGCCAACTGGTACCCACCATGCCGTGGATTCACCCAATTGCTTGTTGGTATCTATGAGGAGCTGAAAAGCAGTGAACCACAATTTGAGATTGTCTATGTGTCCTCTGATGAAGACTTGGATGCCTTTAATAACTTCTATGGAAACATGCCGTGGCTTGCAATTCCGTTCTCTGACTTGGAAACAAAGAAGGCCTTGAACAGAAAGTATGACGTGGAAGGTATCCCATGCTTAATAATTTTGCAACCTGACGACAATAAAGAAGGCACAACACTTCGTGATGGGGTAGAACTTATTTATCGTTATGGAACCCAAGCTTATCCATTCAGTAAAGAGAGGTTGGAGCAGCTACAAGAGGAAGAGAGAGAGAAGCGTGAAAACCAGACCCTCACTAATTTACTAGCAAACCAACATAGAGACTATGTTTTGGGTCAAGCGGGACTCAAACAGGTGCGTGTTGCTTCTTTAGTTGGTAAAACTATTGGACTCTACTTCTCAGCCGGATGGTGCGTCCCATGTATGAAGTTCACTCCCAAACTGATTGCTGTTTATCAGAAGATCAAGCAGGAGTTAGCTGAAAAAGGAGAGGAAGACTTTGAAATTGTGCTGGTTTCCAGCGACCGAGACCAAGCCTCTTTTGACTCATACTACAGTAAAATGCCTTGGTTAGCATTGCCTTTTGGAGACCCAGAGATCAAGAACCTTGCTAGGCACTTTAATGTACAAGGGATTCCTTGCTTGATAATTATAGGCCCTGATGGTAAAACAATAACAGTACATGGTAGGAACTTAATAAACTTGTACCAAGAAAATGCCTACCCTTTCACTGATGCCAAAGTGGAGCTGCTAGAGAAACAACTTGAAGAGGAGGCCAAGGACCTTCCAACATTGGTGTTTCATGAAGGGCATCACCATGATCTTAATTTGGTGTCAGATGGCAATGGGGGAGGGCCCTTTATCTGCTGTGTCTGTGATGAGCAAGGTTCCAGCTGGGCCTACCAGTGTCTCCAATGTGGCTATGAAGTGCACCCAAAGTGCGTCAAAACTGTGGAACGTGACAATGTCTTGGTGGGCAGGTGA 1269 0.4437 MMRTEMKDGTQALVINNGNSGEVSSSKLSNLLASKDRDFLLSSTTGAQVKVSDLEGKVVGLLFAANWYPPCRGFTQLLVGIYEELKSSEPQFEIVYVSSDEDLDAFNNFYGNMPWLAIPFSDLETKKALNRKYDVEGIPCLIILQPDDNKEGTTLRDGVELIYRYGTQAYPFSKERLEQLQEEEREKRENQTLTNLLANQHRDYVLGQAGLKQVRVASLVGKTIGLYFSAGWCVPCMKFTPKLIAVYQKIKQELAEKGEEDFEIVLVSSDRDQASFDSYYSKMPWLALPFGDPEIKNLARHFNVQGIPCLIIIGPDGKTITVHGRNLINLYQENAYPFTDAKVELLEKQLEEEAKDLPTLVFHEGHHHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVKTVERDNVLVGR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02499 422 CDD TryX_like_TryX_NRX 203 338 IPR045870 GO:0004791
Rops10g02499 422 Pfam C1 domain 365 410 IPR004146 -
Rops10g02499 422 ProSiteProfiles Thioredoxin domain profile. 30 164 IPR013766 -
Rops10g02499 422 Gene3D Glutaredoxin 198 340 - -
Rops10g02499 422 SUPERFAMILY Cysteine-rich domain 354 411 IPR046349 -
Rops10g02499 422 Pfam Thioredoxin-like 56 148 IPR012336 -
Rops10g02499 422 Pfam Thioredoxin-like 221 318 IPR012336 -
Rops10g02499 422 Coils Coil 170 194 - -
Rops10g02499 422 PANTHER THIOREDOXIN 22 394 - -
Rops10g02499 422 SUPERFAMILY Thioredoxin-like 36 151 IPR036249 -
Rops10g02499 422 ProSiteProfiles Thioredoxin domain profile. 182 351 IPR013766 -
Rops10g02499 422 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 365 417 IPR002219 -
Rops10g02499 422 CDD C1 384 416 - -
Rops10g02499 422 SUPERFAMILY Thioredoxin-like 203 323 IPR036249 -
Rops10g02499 422 Gene3D Glutaredoxin 32 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02499 Rops-Chr10 43626438 43631125 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02499 K17609 - gmx:100815038 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02499 10 43626438 43631125 Rops10g02499 10 43626438 43631125 ECH