Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02458 ATGGAAATTCAACAGAAACCCATCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGTGGTAGCAGCCCTGGAAAGAACCCCAGCTACCAACTTGCTGCTATTCAACTCGGAAAACAACTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGAGGAAGCATTGGGTTGATGGGTCTAATCTCACAAGTTGTCTATGATGGTGGACGCCACGTGTTAGGAGTGATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACTGTAGGAGAAGTAAGAGCTGTTTCAGGCATGCACCAACGCAAGGCTGAAATGGCTCGACAAGCTGATGCATTTATTGCCTTACCAGGTGGATACGGCACCCTTGAAGAACTATTGGAAATTATCACCTGGGCTCAACTAGGGATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACGACTCTTTGCTGGCGTTCATGGACAAAGCTGTGGATGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTTTCTGCCCATACTGCCCAAGACCTCATGTGCAAGCTTGAGGAATATGTCCCAGAACACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGCTAACACAGCAAAGTCAGATATTTCTCGTTGA 660 0.4773 MEIQQKPIKSRFRRICVYCGSSPGKNPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLMPRELTGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYDSLLAFMDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLANTAKSDISR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02458 219 NCBIfam Rossman fold protein, TIGR00730 family 14 190 IPR005269 GO:0009691|GO:0016787
Rops10g02458 219 Gene3D - 3 189 - -
Rops10g02458 219 FunFam CASP-like protein 3 189 - -
Rops10g02458 219 PANTHER LOG FAMILY PROTEIN YJL055W 6 210 - -
Rops10g02458 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Rops10g02458 219 Pfam Possible lysine decarboxylase 57 186 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02458 Rops-Chr10 43006013 43008954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02458 K22522 - gmx:100782787 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02458 10 43006013 43008954 Rops10g02458 10 43006013 43008954 ECH