Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02435 ATGGGAGCTCTTGCTACATTCGCCCCTTGGACTCCCGAGGATGATCTTTTGCTCAAAAACGCCGTTGAGGCTGGTGCTTCCTTAGAGTCGCTTGCGAAGGGTGCGGTGCAATTTTCTAGAAGATATAGTATTAGAGAAATACAAGATAGATGGTATTCTCTACTCTATGATCCTATCATTTCCGCGGATGCTGCTGCGTGTATGACAAACTTCGAGCTCTCTGCTTCGCCTCTCCCGGCCAAGTTCTTCAAGTTTGGAAATTCAAGAGAGCGGAAAATTGTTTCTGTTAAGAGGAAGGCTGAGAGTGTTCGCACTTGTTATTATGCTATGCGTAAAAGAACCTGCAATGACACGTTAACTCCCATGGACTTGAGTTTTCTTGTTGATCCGGAGGATGGAAATTATATAGAAAATGGAAGTGGTGGTGAGCCTTTACCTGAACACTGCCTGCCTGAAGGTGCTATTTCAAATCACTTTTCAAATCTTGATGGTTTTCCTGAAAATATGATGGATGGTGATGTTGCAAATAATGGAGTTACTGCTCATGCATTTTACACTGGGGTTGATGATCCAGATGGAAAGAATTTCCTCGTTGAGCAAAATAATATACTTAAGGAAGAAACTCAAATTCTTGGGGATAATGTCTCTTCGAATGGAGCTGCTGAGGAATTGGGAGTTCCTGAAGAATTGGTGATAGACAACTTGATTGGAGATGATAATTTAGAGAAAATGCCTTTGTGTGCATTTGATCACATCAACAATGACCCTGGAAATTTGTGTTCTGAGTTTGATGAAGATCATTTATTTGATTCACCTGAGTTAGAGTGTGGAACATCATTTAACAACTTACAGTTATCACCACTTCCTGAACTGCCAATCTGGAGAACAGATGAAAGCATTCAAGAACCTGATATTCCATGTGATGGTTTAAAAGATTCTGTTGCTTGTGGGGAGGATTATCTGGAAGAACTGTCCAATTCACTCTTCAACTTCACCAATGAGGAAGAATTATTTCTGATGGATGTTGATGGAAAAGATGGGATTGATAAGTCTTATTATGATGGTCTGAGTTCACTTTTACTAAATTCTCCTATTGATGTTAGTACAGATCAGATACCTGAAAGGGCTGAAACAGAGTCATCAGTGGCCTTACATGCACATGTTACAAATCTATCAGTTTCTTCTTGTGCAGTAGCAGATGACAACCCAGGGTCACAATCTAGTGGTGTGAAAGTAGTTCACAAATTAGAGTCCCAAATGCCATCTGCTGCCTCAGCTAAAGACCCTCAATTTCCTGAACTAATTAATGGAGTTATTTACTGTGTATTAAATACCGAGGACCCAGAAGTTCCATCTAATGACGATGTTTTTCTACCCTTTGATGCTCCTCCTTCAACATTTTCCTGTTTGTCTAAATCAACTTCTAAAGAATCCAATAAACCGATTTCGTCATCTGTTCAAGATTATGGTTATAGAGCTAGTGAAAGAGGTAAAATTTTGATGCAGGTTGACCGGAAAAATTCCATAGAATCTCGTGCATCTTCTCAGATAAAATGTGAGTTGCCTAATAGTCATGCATCACACACAGTGTCTAGGTGTTCAGTTATTAGTTCTGGTGGCTTAGGTGGAAACAATAATGCAGCAAAAACAACCAATGCTCATCTGCATGCAAATCCAAAGGAAGAGCCTACCAATATTGGCTTGGGAAAGCATCCAAGCAATCACGTGACAAATTCTATCATTGAGAAACCAGCCCTAGGCTCTAATGACTTCAGAAATCATCTCCATCCTAATGGTTCTAGCATGAAACAGGAACAAGAGGTAGCCTTGCCACTTGAAGATCATCAGTTGCAAAGTGCTGAAGTGGGATCCTCAGATGCTCTAGAGTCAGAGCCAGTGATTAGTCCTCCAACATTAGACGAGGAAGAGCAATATATAGAAAGTGATGATGACATTCCTTATTATTCTGACATAGAGGCGATGGTGCTTGATATGGACTTGGATCCTGATGATCAGGATTTGTATTATAATGAAGAAGTATTGAGATATCAACATGAGGAAACTAAGCGAGCCATCATGAGGCTGGAACAGGGTGCTCATTCTTATATGGAGAGAGCCATTGCTTCACATGGAGCATTTGCCATTCTATATGGTCGCCACTCCAAGCATTATATTAAAAAACCCGAGGTTTTACTTGGACGAGCAACAGAAGGTGTTCCTGTAGACATTGACTTGGGCAAAGAAGGTTATGCCAAAACAATATCTCGACGTCAGGCAGTTATAAAGATGGATAAAGATGGGTCTTTCTACATTAAAAACTTTGGCAAGGGTTCAATCCTGGTAAATAACAAAGAAGTGCACACTGGTCAGTCTCATAGACTGCATTCCAATTATCTGATTGAGCTGAGGGGCATGCCATTCATATTTGAGACAAATCAAAGTCGTGTGAAGCAGTACTTGGATCATATTAATGACAATTTTCAGACGTTATAG 2493 0.4027 MGALATFAPWTPEDDLLLKNAVEAGASLESLAKGAVQFSRRYSIREIQDRWYSLLYDPIISADAAACMTNFELSASPLPAKFFKFGNSRERKIVSVKRKAESVRTCYYAMRKRTCNDTLTPMDLSFLVDPEDGNYIENGSGGEPLPEHCLPEGAISNHFSNLDGFPENMMDGDVANNGVTAHAFYTGVDDPDGKNFLVEQNNILKEETQILGDNVSSNGAAEELGVPEELVIDNLIGDDNLEKMPLCAFDHINNDPGNLCSEFDEDHLFDSPELECGTSFNNLQLSPLPELPIWRTDESIQEPDIPCDGLKDSVACGEDYLEELSNSLFNFTNEEELFLMDVDGKDGIDKSYYDGLSSLLLNSPIDVSTDQIPERAETESSVALHAHVTNLSVSSCAVADDNPGSQSSGVKVVHKLESQMPSAASAKDPQFPELINGVIYCVLNTEDPEVPSNDDVFLPFDAPPSTFSCLSKSTSKESNKPISSSVQDYGYRASERGKILMQVDRKNSIESRASSQIKCELPNSHASHTVSRCSVISSGGLGGNNNAAKTTNAHLHANPKEEPTNIGLGKHPSNHVTNSIIEKPALGSNDFRNHLHPNGSSMKQEQEVALPLEDHQLQSAEVGSSDALESEPVISPPTLDEEEQYIESDDDIPYYSDIEAMVLDMDLDPDDQDLYYNEEVLRYQHEETKRAIMRLEQGAHSYMERAIASHGAFAILYGRHSKHYIKKPEVLLGRATEGVPVDIDLGKEGYAKTISRRQAVIKMDKDGSFYIKNFGKGSILVNNKEVHTGQSHRLHSNYLIELRGMPFIFETNQSRVKQYLDHINDNFQTL* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02435 830 SMART FHA_2 729 786 IPR000253 GO:0005515
Rops10g02435 830 Pfam FHA domain 731 802 IPR000253 GO:0005515
Rops10g02435 830 SUPERFAMILY SMAD/FHA domain 711 811 IPR008984 GO:0005515
Rops10g02435 830 Gene3D - 681 823 - -
Rops10g02435 830 FunFam Microspherule protein 1 673 822 - -
Rops10g02435 830 ProSiteProfiles Forkhead-associated (FHA) domain profile. 730 786 IPR000253 GO:0005515
Rops10g02435 830 PANTHER MICROSPHERULE PROTEIN 1 7 826 IPR037912 GO:0002151|GO:0031011|GO:0071339
Rops10g02435 830 Pfam N-terminal region of micro-spherule protein 10 73 IPR025999 -
Rops10g02435 830 CDD FHA_MCRS1 708 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02435 Rops-Chr10 42604989 42612498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02435 - - aprc:113865691 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02435 10 42604989 42612498 Rops10g02435 10 42604989 42612498 ECH