Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02391 ATGGGTGTTATTTCGTGTCACTGTTACTGCCCTGTTGGATTCACCAAACCCTACCTCTCTGGTCAGAATCTTCGCCATTCCACTCCTCTCTCTTCCATTTCCCTTTCTTCTCCGCCATGTCGATTCAGAATATCGTGCGTCGCCTCTTCCGCTGTCACTGCGAAAGTTGGGGTGAAAGATTTTCTTCACTTAGATGATTTTGATAAGGAAACTATTTTGAAGATATTGGATCGAGCTATTGAGGTGAAGGCATTGTTAAAATCAGGGGATAGGAAATTTCGACCTTTTGAAGGGAAGACAATGGCGATGATATTCGAAAAGCCATCCATGAGAACACGGGTTTCATTTGAGACTGGTTTCAATTTGTTAGGTGGCCATGCTATATATTTAGGACCTGATGACATCCAAATGGGAAAGCGAGAAGAGACTCGTGATGTTGCTCGTGTTTTGTCTCGCTATAATGATCTCATTATGGCTCGTGTATTTGCTCATCAGGACATACTTGATCTTGCAAAGTATGCAACTGTGCCAGTCATCAATGGGTTGACAGATTACAATCATCCCGTCCAGATAATGGCTGATGCCCTTACTATGATTGAGTACATTGGTCGGTTTGAAGGTACCAAGGTTGTCTACGTTGGGGATGGAAATAATATTGTTCACTCATGGTTGTTGATGGCTTCTGTAATTCCTTTTCACTTCATTTGTGTGTGTCCAAAAGGTTTTGAACCTGATGCAAAAACTGTAGAGAAGGCAATGAAGGCTGGAGTCAGCAAGATTGAGATAACTCATGATCCCAAAGAAGCTGTTAGAGGAGCTGATGTTGTGTATTCAGATGTTTGGGCCAGCATGGGGCAAAAGGAAGAAGCTGCATACCGCCGCGAAGTGTTTAAAGAATTTCAGGTGAACCGAAGTCTTATGGATATGGCTGGTTCAAAAGCGTTTTTCATGCATTGCTTACCAGCAGAAAGAGGGGTGGAGGTAACTGACGAAGTTGTGGAAGCTCCTAATTCAGTAGTCTTTCCGCAAGCTGAGAACCGAATGCATGCACAGAATGCCGTAATGCTCCATGTGCTAGGCAAGTAG 1086 0.4355 MGVISCHCYCPVGFTKPYLSGQNLRHSTPLSSISLSSPPCRFRISCVASSAVTAKVGVKDFLHLDDFDKETILKILDRAIEVKALLKSGDRKFRPFEGKTMAMIFEKPSMRTRVSFETGFNLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDLIMARVFAHQDILDLAKYATVPVINGLTDYNHPVQIMADALTMIEYIGRFEGTKVVYVGDGNNIVHSWLLMASVIPFHFICVCPKGFEPDAKTVEKAMKAGVSKIEITHDPKEAVRGADVVYSDVWASMGQKEEAAYRREVFKEFQVNRSLMDMAGSKAFFMHCLPAERGVEVTDEVVEAPNSVVFPQAENRMHAQNAVMLHVLGK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02391 361 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 59 200 IPR006132 GO:0006520|GO:0016743
Rops10g02391 361 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 58 360 IPR024904 GO:0004585|GO:0006591
Rops10g02391 361 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 312 321 IPR006130 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 105 124 IPR006130 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 324 347 IPR006130 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 187 198 IPR006130 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 FunFam ornithine carbamoyltransferase, chloroplastic 59 194 - -
Rops10g02391 361 Gene3D Aspartate/ornithine carbamoyltransferase 190 355 IPR036901 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 57 361 - -
Rops10g02391 361 PRINTS Ornithine carbamoyltransferase signature 136 149 IPR002292 GO:0016743
Rops10g02391 361 PRINTS Ornithine carbamoyltransferase signature 338 349 IPR002292 GO:0016743
Rops10g02391 361 PRINTS Ornithine carbamoyltransferase signature 103 117 IPR002292 GO:0016743
Rops10g02391 361 PRINTS Ornithine carbamoyltransferase signature 276 286 IPR002292 GO:0016743
Rops10g02391 361 PRINTS Ornithine carbamoyltransferase signature 176 190 IPR002292 GO:0016743
Rops10g02391 361 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 58 360 IPR036901 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 Gene3D Aspartate/ornithine carbamoyltransferase 59 189 IPR036901 GO:0006520|GO:0016597|GO:0016743
Rops10g02391 361 FunFam Ornithine carbamoyltransferase 195 346 - -
Rops10g02391 361 NCBIfam ornithine carbamoyltransferase 59 359 IPR002292 GO:0016743
Rops10g02391 361 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 206 357 IPR006131 GO:0006520|GO:0016597|GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02391 Rops-Chr10 42040384 42044200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02391 K00611 - gmx:100796780 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02391 10 42040384 42044200 Rops10g02391 10 42040384 42044200 ECH