Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02388 ATGCCTTATACTTACGTGTCCACTAATTGCTTTGCTGGCTATTTTCTGCCAACATTAGCGCAACCTGGAGTCAAAGAGCCACCTCCTCCCAAAGACAAAGTCATTATTTTGGGCGATGGAAATTCCAAAGCAATCTTCAACGAGGAAGGGGACATTGGAACCTACACCATTAGAGCTGTGGATGACCCAAGGACATTGAACAAGGTTCTCTACCTCATGCTCCCTAAGAACATTTACTCAGTCAACGAGCTTGTCGCCTTGTGGGAGAAAAAAATTGGCAAGACCCTCGAAAAAAATTATTTTCCAGAAGAGAAGCTTCTCAAGGACATTGAAGAGGCACCTTTTCCACTCAATATGGTATTAGCAATCATGCACTCGGTGTTCGTGAATAGTGACCCCACTAACTTTGAGATTGATCCTTCTTTTGGGGTTGAGGCTTCCACATTGTACCCAGATGTCAACTACACTACTGTGGAAGAATACCTTGATCAGTTCGTTTGA 501 0.4351 MPYTYVSTNCFAGYFLPTLAQPGVKEPPPPKDKVIILGDGNSKAIFNEEGDIGTYTIRAVDDPRTLNKVLYLMLPKNIYSVNELVALWEKKIGKTLEKNYFPEEKLLKDIEEAPFPLNMVLAIMHSVFVNSDPTNFEIDPSFGVEASTLYPDVNYTTVEEYLDQFV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02388 166 PANTHER PINORESINOL REDUCTASE-RELATED 2 166 - -
Rops10g02388 166 Gene3D - 8 162 - -
Rops10g02388 166 Pfam NmrA-like family 1 156 IPR008030 -
Rops10g02388 166 Gene3D - 1 150 - -
Rops10g02388 166 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 136 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02388 Rops-Chr10 42022456 42023335 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02388 K23050 - gmx:100813308 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02388 10 42022456 42023335 Rops10g02388 10 42022456 42023335 ECH