Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02375 ATGCTGGTGAAGTTGCATTTCCAGGTTGTAATTGCATTTGCTTTGCGGTGCCAGAATCTGATTCTCTCTTCCAATTCGTACTGTCTTTGTCCTCCACCACCACCATCGTCGTCATGTATTGGCCTATTTAGTCACTGCACGATGCGAATTCCAAAGAGGCCCCTATCATTCTCTCTCTCTAACTTATCTCCTCAACTCGTAGCACCTTTTTTATCTTCTCGCCTTTGCTTTGTTTCTGGAATCTGCGCGAAACCTCCTCGCTCCCTCACATCACCAGGTGCTAACCAGTTGCATGCTCAATATTCAATGGAAGAGAACCATGAAATTTCAGTGGATCTGCCTGGCAGTGATAGTGGCAAAAAGCCATGTGTATGGCCATCATCTCCCAATCATGGATGTAAAGCTTATATAGGCAAACAGATATTTTGTAACCGGTCGCTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAATACAAGCCCGAAACTTTTGAATCTCTTGCTTATCAGGGCACTGTTAAAAAGCTGGTTTATGATTTGGGATACCCTTGCGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGATTGGTTCTTGACAAAAAAAGAGGCAACATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAAAGAATTGTCAAAAGAAGATAAAGTTGGGACTTATGGAAATACTTTAGTACGTGATTCTTTTGATGAGCCAGACTATGCTCTAATTGATACACTCTTTTCACTTGCGGAAGCCTACTTGTTTGCTCAGTTGGTTGATTTTAAGGATTGCAATCCTGGAAAGATTCAAGATGGTGTTGATTATGCTCGCATGTATAAAGATGTTCGAGCAGCAGTTGATTTGTGCCACCGTGATGGAACATTGAAGCAAATGGTTGCCAAAAATCCCAAAAGGTATATTAACGAAGACACCTCAATTGTGCCTATGCTTGAAATGCTCAGAGAATCAGGACGTGCGACATTTTTAGTGACAAATAGTTTATGGGACTATTCGAACATTGTCATGAATTTCCTCTGTGGATCCAGTATGGTAGATGGCAGCAACAATTTTGACTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCATGAGGAAAATCGTGCCAACCTATTTGAGGTCGTGCCAGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGTAACATCTCAGCAAGGTTATTCACAGAAGCAAAGAATCATGCTTGTCAAGTTTTCCAGGGAGGCTGTGTTGGTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTACGTTGGGGATCACATTTATGGAGATATACTACGCAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTTGTCCCAGAGCTTGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGATACCCGCAAGGAACTTCAATTCTTGAGAAGTGAGCGTGATCGCATTGAGGATGAAATACATCATTTGAAGTGGTCTCTCAAATTCAAGAATCCAAATGCTGATGCCAAGCAAAAGTTATCGTCAGAACTTGATAAATTGGAGCTTGAAAGAGAGAGAGTGCGATTAAGTCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCACGAGCCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGTCAAGTGTGTAACCTGGCATTGTACTCTCCAGACAAGTATTACAGACCAAGTGAAGATTTTATGCAGCATGAATTTGACATTCTGGCTTGTGAGCCTGGAGAAATGTAA 1914 0.4159 MLVKLHFQVVIAFALRCQNLILSSNSYCLCPPPPPSSSCIGLFSHCTMRIPKRPLSFSLSNLSPQLVAPFLSSRLCFVSGICAKPPRSLTSPGANQLHAQYSMEENHEISVDLPGSDSGKKPCVWPSSPNHGCKAYIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTVKKLVYDLGYPCELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIQDGVDYARMYKDVRAAVDLCHRDGTLKQMVAKNPKRYINEDTSIVPMLEMLRESGRATFLVTNSLWDYSNIVMNFLCGSSMVDGSNNFDWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARLFTEAKNHACQVFQGGCVGHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWESRDTRKELQFLRSERDRIEDEIHHLKWSLKFKNPNADAKQKLSSELDKLELERERVRLSHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVCNLALYSPDKYYRPSEDFMQHEFDILACEPGEM* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02375 637 NCBIfam HAD-IG family 5'-nucleotidase 141 509 IPR008380 -
Rops10g02375 637 Gene3D - 137 186 IPR023214 -
Rops10g02375 637 Gene3D - 301 518 IPR023214 -
Rops10g02375 637 Coils Coil 536 567 - -
Rops10g02375 637 FunFam Cytosolic purine 5-nucleotidase 301 518 - -
Rops10g02375 637 Pfam 5' nucleotidase family 141 627 IPR008380 -
Rops10g02375 637 SUPERFAMILY HAD-like 139 628 IPR036412 -
Rops10g02375 637 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 139 626 IPR008380 -
Rops10g02375 637 Coils Coil 502 522 - -
Rops10g02375 637 CDD HAD_cN-II 142 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02375 Rops-Chr10 41848081 41854836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02375 - - gmx:100793438 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02375 10 41848081 41854836 Rops10g02375 10 41848081 41854836 ECH