Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02373 ATGTCAGATCAAGTAAATGGCTTGCCTGAAGACCAAGCATGGCCAGAACTAAAGCTTCCAGACTTGTTGCACAGTGATGCTGTTCGACAAGTCCATGCAACTATTGAAAAGGAATGGGATTTCCTCCAAAGGTCAGCTTGCCAAACGGCTGCAGGGAGGGCTCTGTGGAAGCATGTGATCCATGATCCACTGGCTGCCTTACTGGCAGGAGAGACTTACTTGAGAAACCTCCATGAAAAGATAAAGAAGGACCGTCTCAACAATGCGCGTGAAATTTCTGGAGTGATTCTTGCAGTTCGAACCCTTTGGTTTGATTCTAGACTGGAAGATGCTCTCAATTCCCCGAATGGCAGAGAAGCACAGGTCGTTCTCCTTGGTGCAGGAATGGACACCAGAGCATATCGTTTGAATTGCTTAAAGGACAGCGATGTCTTTGAGGTTGACTTTCCAGAAGTCTTGGAGGTGAAAACCAATATTTTGCAAGCGGCTAAGGAATCCACATACGACTCCCAGCATATTATGTCCAAAGCCAAATCCTTAACCAGAGTAGCAGCTGACATAAGAGAAAATGACTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTACCACAGAAGAGCACGGTTTGGATTCTAGAAGACTTCATGAATAAGCCATCAACCACATTATCCAATTCAGCCTTTCAATTTTACAGTGACTGGCCAGACCATCTCTTGCCATCTATTGGATTCAGTCATGTAAAACTTTCACAAATTGGAGACCCAGATGCCCATTTCGGCCTCTTGAATGATCCGTTAAATCTCTTCAACAAGCTCCGGAGCTTGCCCAGGTCATTACAAACCAATCCAGACGATGGAAAGCCATGCTGTCGCTTGTACTTGGTGGAAGCTTCAGGATCACCCGATCAAAATGCTGCGAATAAAGGGTGA 927 0.4531 MSDQVNGLPEDQAWPELKLPDLLHSDAVRQVHATIEKEWDFLQRSACQTAAGRALWKHVIHDPLAALLAGETYLRNLHEKIKKDRLNNAREISGVILAVRTLWFDSRLEDALNSPNGREAQVVLLGAGMDTRAYRLNCLKDSDVFEVDFPEVLEVKTNILQAAKESTYDSQHIMSKAKSLTRVAADIRENDWMEKLQIAGFLPQKSTVWILEDFMNKPSTTLSNSAFQFYSDWPDHLLPSIGFSHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLQTNPDDGKPCCRLYLVEASGSPDQNAANKG* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02373 308 NCBIfam SAM-dependent methyltransferase 56 212 IPR011610 GO:0008168
Rops10g02373 308 Pfam Leucine carboxyl methyltransferase 46 212 IPR007213 GO:0008168|GO:0032259
Rops10g02373 308 Gene3D Vaccinia Virus protein VP39 36 234 IPR029063 -
Rops10g02373 308 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 213 279 - -
Rops10g02373 308 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 294 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02373 - - pvu:PHAVU_009G057800g 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02373 10 41830692 41832461 Rops10g02373 10 41830692 41832461 ECH