Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02372 ATGGCGGCAGAGGTGGGGTGCTGTGGAACAAAATTCTGGTTGTTCGTTATGGTTATCATAGGATTGGTGTGTTTCGCTGGACTAATGGCTGGTCTCACTCTTGGACTCATGTCTTTGGGACTCGTCGACCTCGAAGTTCTCATCAAGTCTGGTCGTCCTCAACATCGCATCTATGCTGCAAAAATTTTTCCTGTGGTTAAGAACCAACATCTTTTGCTTTGCACCCTTTTAATTGGTAACTCCTTAGCCATGGAGGCCCTTCCAATTTTTCTTGATGCCCTTGTGCCTCCTTGGGCTGCTGTCTTGGTTTCTGTCACACTCATCCTCGTGTTTGGAGAGATATTGCCACAAGCAATTTGTACTCGATATGGGTTGACGGTTGGTGCAACACTGGCCCCACTTGTTCGTGTTCTTCTTCTAGTATTCTACCCCATCTCTTATCCAATTAGCAAGTTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCTCTTTTAAAGAGGGCAGAGCTCAAGACTTTTGTAAATTTTCATGGGAATGAGGCTGGGAAAGGAGGAGATTTAACTCATGATGAGACAACCATCATAGCTGGTGCACTTGAATTGACTGAGAAGACTGCAAAAGATGCCATGACTCCCATCTCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACCCTGAATTCAATAATGACGATGGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAGCAAACAAATATTATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAAAACATGCCTCTGTATGATATACTGAATGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTGTATAGGGATCTAAATGATAAAAATGAAGCATCGAAAAAAGTTAAAGATGGGGAGCAAAGCACACCCTCGGATAAAGGTGCTAAGGAGTCATGTGATACTTTGACTGCTATTAGTAAGATTGATGGTGGCCCACAGGCAAAAAAAAGCCCACCAGCAACTCCTGCTTTTAAAAAGCGACATCGAGGTTGTTCATATTGCATCCTGGACGTTGATAATGCTCCCTTGCCAGTGTTTCCACCAAATGAAGTGGTTGTTGGTGTTATTTCAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGATACTAGATGAAACCGATGAATATGTCAATATCCATAACAAGATAAAAATTAACATGAATGCTTCTAAGGAGAAGGCTCCTGATGCAAATCTGTTGCAGCCTTCTACTTTAACAGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCTACTACCACTGCAACAGGCTCACCTACCACAATTGATCAAATCTCCGAAAGCGAGTCACTCAGGAATCAATAG 1443 0.42 MAAEVGCCGTKFWLFVMVIIGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQHRIYAAKIFPVVKNQHLLLCTLLIGNSLAMEALPIFLDALVPPWAAVLVSVTLILVFGEILPQAICTRYGLTVGATLAPLVRVLLLVFYPISYPISKFLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTMGHSRVPVYAGEQTNIIGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKNEASKKVKDGEQSTPSDKGAKESCDTLTAISKIDGGPQAKKSPPATPAFKKRHRGCSYCILDVDNAPLPVFPPNEVVVGVISMEDVIEELLQEEILDETDEYVNIHNKIKINMNASKEKAPDANLLQPSTLTVQGHTPTNSISTATTTATGSPTTIDQISESESLRNQ* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02372 480 Gene3D - 189 324 IPR046342 -
Rops10g02372 480 FunFam DUF21 domain-containing protein 189 324 - -
Rops10g02372 480 SUPERFAMILY CBS-domain pair 194 404 IPR046342 -
Rops10g02372 480 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Rops10g02372 480 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Rops10g02372 480 PANTHER METAL TRANSPORTER CNNM 3 436 IPR045095 GO:0010960
Rops10g02372 480 MobiDBLite consensus disorder prediction 444 480 - -
Rops10g02372 480 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Rops10g02372 480 MobiDBLite consensus disorder prediction 314 335 - -
Rops10g02372 480 MobiDBLite consensus disorder prediction 314 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02372 Rops-Chr10 41820178 41824597 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02372 K16302 - gmx:100804572 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02372 10 41820178 41824597 Rops10g02372 10 41820178 41824597 ECH