Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02360 ATGGAGTCAGAACTGAAAGACCTGAATTCAAAACCAGCGAAACCAAATGGCAATAGCATTCGTGACGATCGTCCTCTGCTGAAGTCGGATTCGGTTTCTTCAGAGAACGTGGAACTTCAGGACATGGAGAAGAAATTCGCGGCATTTGTGAGACGCGACGTTTATGGAACCATGGGGAGGGGAGAGTTAGCCACGAAGGAGAAGCTCTTACTTGGTTTCGCCTTGGTCACTCTCCTTCCCATTAGAGTTGCTCTTGCTTTCACTATCTTGGTCTTTTATTACCTCATTTGTAGGGTTTGTACCCTATTCTCTGCCCCAAACCGTGAGGAGGAGCAGGAGGATTACGCTCACATATGTGGGTGGAGGAGGACCGTTATCGTTGGGTGTGGAAGAGCACTATCTAGGGCTATGCTTTTCATTTTTGGCTTTTATTGGATCCTTGATAACTCTATCACTCAGGAGGAAGACAAACAGCAGCCTGAAGAGATGGGAAGGCCTGCGGTAATAATATCTAATCACGTGTCGTACTTGGATATTTTGTATCATATGTCTTCCTCATTCCCAAGTTTTGTTGCTAAGAAATCAGTGGCCAAACTTCCTCTAGTTGGTCTCATCAGCAAATGCCTTGGTTGTGTCTATGTTCAGCGTGAATCAAAGTCATCGGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTCATCAGAATAAATCTGCTCCATTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGTGATTTCCTCCTACCATTCAAGACTGGTGGTTTTTTGGCGAAGGCACCAGTACTTCCTGTAATTTTAAAATACCATTACCAGAGATTTAGCCCTGCCTGGGATTCGATATCTGGGCTGCGTCATGTGATATTTCTCCTGTGTCAATTTGTAAATTATATGGAGGTGAAACGATTGGCTGTTTACCATCCCTCGCAGCAGGAGATGGATGACCCCAAACTATATGCTAATAATGTTAGAAGGTTGATGGCTAATGAGGGTAATTTGATACTTTCTGATATTGGGCTAGCTGAGAAACGAATATATCATGCTGCTCTCAATGGTTTGTTTTCCCAATGCTAA 1110 0.4351 MESELKDLNSKPAKPNGNSIRDDRPLLKSDSVSSENVELQDMEKKFAAFVRRDVYGTMGRGELATKEKLLLGFALVTLLPIRVALAFTILVFYYLICRVCTLFSAPNREEEQEDYAHICGWRRTVIVGCGRALSRAMLFIFGFYWILDNSITQEEDKQQPEEMGRPAVIISNHVSYLDILYHMSSSFPSFVAKKSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSAVVTERIREAHQNKSAPLMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILKYHYQRFSPAWDSISGLRHVIFLLCQFVNYMEVKRLAVYHPSQQEMDDPKLYANNVRRLMANEGNLILSDIGLAEKRIYHAALNGLFSQC* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02360 369 CDD LPLAT_LPCAT1-like 135 356 IPR045252 GO:0008374
Rops10g02360 369 SMART plsc_2 167 282 IPR002123 GO:0016746
Rops10g02360 369 MobiDBLite consensus disorder prediction 1 33 - -
Rops10g02360 369 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 74 347 - -
Rops10g02360 369 Pfam Acyltransferase 158 278 IPR002123 GO:0016746
Rops10g02360 369 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 35 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02360 Rops-Chr10 41624294 41629843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02360 1 368 Acyl Lipid Metabolism Gene Families AT1G80950 62.944 3.41e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02360 K13510 - gmx:100820536 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02360 10 41624294 41629843 Rops10g02360 10 41624294 41629843 ECH