Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02359 ATGCCCGTGGTGATGAAGTTTCAATCTCATGCTAAACCGGTTTCTGAACCGCGAGCCATTTTGAAACCGGCCGGAAACAGAGTTACCGTTGTTTCCGAAGAGCCGAAACACAAGAAGAAGGAGAACCTGAAGAATCCTCAACGTATAAGAAAGCAGGCACAAGAAATTTCTGACTCCATTATCCGAAGCAACGTGTCTTTGGATAGCACGGGTTCATCTGATTCCTCTTCAAGCAATTCATCAGCGAAAAAGGTCAACCCTGTTACTGCAAGTAAGAGGAACGTGAAGCGCAATGGGTTTAAGCCGGTTAGGGTTGTGCCCGATGCCGGCGACGTAGGTACCTTGTCTCCTCCGTCTCCCAAGGTCTCAGCACCGCCCAAGAGGTGTGATTGGATCACATCACATTCTGACCCTCTTTATACTGTTTTCCATGATGAAGAATGGGGTGTTCCTGTTGATGATGATAGAAAGCTATTTGAGCTTCTAGTCTTTTCACAAGCATTAGCAGAACACAGTTGGCCAGCAATTCTTAAACACACAGGCATATTCAGGCATCTTTTTGAAAATTTTGACCCATCGTCAATTGCACAGTTTACTGAGAAGAAGTTGCTGATACCGAAAATAAACGGCAACCCATTGTTATCAGAACCGAAGCTCCGTGCCATTGTAGAAAATGCTAAACAAGTACTTAAGGTGCAGCAGGAGTTTGGTTCATTCAGCAATTACTGCTGGAGATTTCTTAACCACAAACCAATAAGAAATGAATTTCGATATGGACGTCAAGTACCTGTGAAGACCCCAAAAGCAGAACTCATGAGCAAGGACATGATGCGCAGAGGTTTCCAATGTGTGGGACCAACGGTAGTTTATTCGTTCATGCAAGTAGCAGGACTCGTTAATGATCACCTATTAACATGCTTCAGGTACCACGAATGCAATGTGACAACCGAAAAACGAGTTTAA 963 0.4424 MPVVMKFQSHAKPVSEPRAILKPAGNRVTVVSEEPKHKKKENLKNPQRIRKQAQEISDSIIRSNVSLDSTGSSDSSSSNSSAKKVNPVTASKRNVKRNGFKPVRVVPDAGDVGTLSPPSPKVSAPPKRCDWITSHSDPLYTVFHDEEWGVPVDDDRKLFELLVFSQALAEHSWPAILKHTGIFRHLFENFDPSSIAQFTEKKLLIPKINGNPLLSEPKLRAIVENAKQVLKVQQEFGSFSNYCWRFLNHKPIRNEFRYGRQVPVKTPKAELMSKDMMRRGFQCVGPTVVYSFMQVAGLVNDHLLTCFRYHECNVTTEKRV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02359 320 Pfam Methyladenine glycosylase 134 308 IPR005019 GO:0006284|GO:0008725
Rops10g02359 320 SUPERFAMILY DNA-glycosylase 127 312 IPR011257 GO:0003824|GO:0006281
Rops10g02359 320 PANTHER OS04G0501200 PROTEIN 17 317 - -
Rops10g02359 320 Gene3D Hypothetical protein; domain 2 127 310 - -
Rops10g02359 320 MobiDBLite consensus disorder prediction 49 93 - -
Rops10g02359 320 MobiDBLite consensus disorder prediction 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02359 Rops-Chr10 41618722 41622944 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02359 K01246 - gmx:100306457 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02359 10 41618722 41622944 Rops10g02359 10 41618722 41622944 ECH