Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02357 ATGCTGGAAGCAATGGAAAGTTCCGTGAATGGTGGGTTCTCCCATTTACAGAGCTGTGGAGATAGCAGCGAAGAGGAGCTCTCTGTGCTCCCTCGTCATACAAAGGTGGTTGTAACTGGAAATAATCGTACCAAATCGGTGCTCGTTGGTCTCCAAGGAGTGGTTAAAAAAGCCGTTGGGTTAGGGGGATGGCATTGGCTGGTTCTTACAAATGGTATCGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTGATCGAAGCACCCACCGGTAACGAGGAAGATGATGACCTTGAATTTGATAATGTGCAATGGAATGGATCAGATATGGCATCGGACGACACACAAAAGTCCCACAAATCGAGGCACAGGATGCATAGATCATTGGGATCATCTCACAAGACCATGAGTAGGTCCTTCTCTGGTGATTCACAGTCCAAGGGGTCCGTTTCTATGCCTCATGGGTCCACGAAGCTTGACTTAAGCAAACTTGAAATGGCTGCATTGTGGAAATATTGGCGACATTTCAATCTCGTGGATGCGGTTCCAAACCCATCAAAAGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCTCAGCAAATGGACGAGTTGCAGGTCATTGTGGGATTTGTCCAAGCTGCAAAGAGGCTCAAGAGTGTGTGCAAATGA 672 0.4688 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDMASDDTQKSHKSRHRMHRSLGSSHKTMSRSFSGDSQSKGSVSMPHGSTKLDLSKLEMAALWKYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKSVCK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02357 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Rops10g02357 223 MobiDBLite consensus disorder prediction 105 155 - -
Rops10g02357 223 Gene3D - 138 223 IPR038291 -
Rops10g02357 223 PANTHER SAP30 21 220 IPR024145 -
Rops10g02357 223 MobiDBLite consensus disorder prediction 131 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02357 Rops-Chr10 41583031 41586278 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02357 - - gmx:100809195 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02357 10 41583031 41586278 Rops10g02357 10 41583031 41586278 ECH