Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02306 ATGTCATCAAGAACAACGATTCCAGATGAAGTTTTATTCAAGAAGTGGAGCACCGAAGCAGCTACAGAAGAAACAGAGGGTGTCTCCATCATAAACGCCGACGACACCACCGGTGACGATTTTTCCGGCGAGGAAATTAAGATGGCCTCTACAACAATCACCACTTCCTTTATCTTCTCGAAATCCCAATCACAGTTCCTCAATTCTATTGGGCAGCCACTGATTCATAACCGCAACAAACACATGTCAATTTCACTTCAACCACCCATAGTTCGTGGTACCCTTTGCTCAGTGTTTATTTGTTCCCACACTCCTTGTACAACCTCTTCAAGTTACTCGCCCAGAAACAGTTTATCCAAGTTTCTTTCAGAAAAGATAGCATTTTTTCTTATTGGGTCGTTTATCTTCATGGGTTGCTTCAGCAAAAGAGCTGCTTTTGCAGTAGCAATGCCTTCCGGTGGAGTGTTGGAGGAGAAGATGAAACCCCAGGAAGAGAAAAGCGAGGAGGAGGAGGAAATGTTGGAAAAGATTCTGGAGAAGGATCCAAGAAATGTTGAGGCTCTCAAGGTGATTTTGTATGGGAAAATTAGGAGAGGGAAGTCAATGGAGGCTGTGAAGTTTGTGGAGAGATTGATTGATGTGGAACCAAATGAGGTTGAATGGAGGCTTTTGCTAGCACTTTGTTATGAGACAATGGGGCAATTGAGTGAGGCTAAAAGATTGTTCAGGGAAATCTTGGAGAAAAGGCCTCTTCTTGTCAAAGCTCTGCATGGTCTGGCCATGGTGATGCACAAAAACCATGAGGGTCCTGCTGTATTTGAAATGCTGAATAAGGCTCAAGAGTTAGCTTCTGATAAAAACAGAGTTACGGAAGAGAGAAATATAAGAATCTTAATTGCACAAATGCTTGTTGTACAGGGTGATTTGGAGGAGGGCTTAAAAAGATTTCAAGAGTTGATTGATCAAAATCCTCGAGATTTCAGGCCTTATCTTTTCCAGGGAATAATATTCAGTCTCCTGGATAAAAAGGAGGAAGCTGCACAGCTGTTTGGGACATATCAAGCGCTCGTGCCTGAAGAGTTTCCTCAGAGGGGATTTCTTGATGATATTGCCTTAACAGCAAAAAGAACATCCCAAGAACAGTTTCAGAAGGAATTTGAAGATCAATCTTCTTACCGGAAGTAG 1185 0.4245 MSSRTTIPDEVLFKKWSTEAATEETEGVSIINADDTTGDDFSGEEIKMASTTITTSFIFSKSQSQFLNSIGQPLIHNRNKHMSISLQPPIVRGTLCSVFICSHTPCTTSSSYSPRNSLSKFLSEKIAFFLIGSFIFMGCFSKRAAFAVAMPSGGVLEEKMKPQEEKSEEEEEMLEKILEKDPRNVEALKVILYGKIRRGKSMEAVKFVERLIDVEPNEVEWRLLLALCYETMGQLSEAKRLFREILEKRPLLVKALHGLAMVMHKNHEGPAVFEMLNKAQELASDKNRVTEERNIRILIAQMLVVQGDLEEGLKRFQELIDQNPRDFRPYLFQGIIFSLLDKKEEAAQLFGTYQALVPEEFPQRGFLDDIALTAKRTSQEQFQKEFEDQSSYRK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02306 394 SUPERFAMILY TPR-like 169 359 IPR011990 GO:0005515
Rops10g02306 394 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Rops10g02306 394 Pfam Tetratricopeptide repeat 199 254 - -
Rops10g02306 394 PANTHER CELL DIVISION CYCLE 16,23,27 166 365 - -
Rops10g02306 394 SMART tpr_5 327 360 IPR019734 GO:0005515
Rops10g02306 394 SMART tpr_5 293 326 IPR019734 GO:0005515
Rops10g02306 394 SMART tpr_5 219 252 IPR019734 GO:0005515
Rops10g02306 394 Pfam Tetratricopeptide repeat 300 354 - -
Rops10g02306 394 Gene3D Tetratricopeptide repeat domain 157 378 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02306 Rops-Chr10 40840829 40845448 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02306 - - gmx:100795327 482.641