Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02297 ATGGCTCTGTCTCTGTCTCTGAGTCTAAGCACCTCAGTGTGTTTCCCACAATTACAACTACAGCAACAGAGATTGACCTCATTGCCAACTCTCAAATTGAAACCCAAAGCAACATTATGTGCTTCTTCCTCTTCCTCTTCCTCTTCCTTAGCTCAACTCAGTGTTGGTGAAGATTTACCATCAAACTATGGAGATTGGTTTCCCAAGCCTGACCCTAACCTTCGCAGAAGAGCCGGCATTTTACTCCATCCGACGTCGTTTCGAGGTCCCTATGGAATCGGCGATCTTGGTGACGAGGCTTTTCGTTTCATTGATTGGCTCCATTACGCAGGTTGCTCCCTTTGGCAGGTGCTGCCTCTTGTGCCTCCTGGTAGAAAGGCTAACGAAGAAGGATCCCCATACTCAGGACAGGATGCGAATTGTGGCAACACCCTCTTGATCTCTCTTGAAGAGCTTGTCAAGGATGGATTGTTAGAAAAACACGAGCTTCCAGAACCAATTGATGCAGAGCGTGTGAATTTTTCAGTTGTTGCTGACCTTAAAGATCCTTTGATTACTAAAGCTGCAGAGAGGCTCATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAATTTTCGTAGGGACCCTAACATATCAAGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGACAGTTTGAACACATTCAGCTGGTACAATTGGCCTGAACCTTTAAGAAACCGCCATCTTGTAGCTCTAGAAAATATTTACCAACAAAAGCAAGATTTTATAAATGTATTTATTGCTGAACAATTCTTGTTCCAAAGGCAATGGCAAAAAGTTCGTAACTATGCACAGAGTCGGGGAATCAGGATAATGGGAGACATGCCCATATATGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTTTACTGAACAGGAAAGGCTTTCCTCTTTCAGTTAGTGGTGTTCCTCCTGATGCATTCAGTGAAACTGGTCAGCTGTGGGGAAGCCCTCTGTATGATTGGAAAGCCATGGAAAAAGAAGGATACTCATGGTGGATACGTCGCATACGACGTGCACAGGATTTATATGACGAATTTAGGATTGACCACTTTAGAGGAATTGCTGGATTTTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGAATATCCTTTTTTGATGCCATTTCCAGAACTGTTGGAAGGGTTAATATTATAGCAGAAGACTTGGGAGTTATCACCGAGGATGTAGTCCAACTAAGAAAATCCATTGGAGCCCCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAGGTGGAGCCGATAATCCTCATTTGCCTCATAATCATGAGTGCAATCAAGTTGTCTACACAGGAACTCATGACAATGACACGATTGAAGGTTGGTGGGAAGCTTTGAACCAAGAAGAGAAATCCAATGTATCAGGTTATCTTTCATTAACTGGAGAAGACGACATTTCATGGGCACTAATCCAGACTGTACTGGCTTCTGTTGCTCAAACAGCAATAATACCCATGCAAGATGTTCTGGGACTGGGGAGTTCTTCCAGGATGAATATTCCTGCAACTCAGTTTGGAAATTGGGGTTGGAGGATGGCAAGTTCTGTCAGCTTTGATAGCTTGGAGAGAGAAGCAGCCAGACTTAAAGAGATGCTTTCAATATATGGCCGGCTTTGA 1725 0.4377 MALSLSLSLSTSVCFPQLQLQQQRLTSLPTLKLKPKATLCASSSSSSSSLAQLSVGEDLPSNYGDWFPKPDPNLRRRAGILLHPTSFRGPYGIGDLGDEAFRFIDWLHYAGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVKDGLLEKHELPEPIDAERVNFSVVADLKDPLITKAAERLISSEGELKTQLENFRRDPNISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRHLVALENIYQQKQDFINVFIAEQFLFQRQWQKVRNYAQSRGIRIMGDMPIYVGYHSADVWANKNQFLLNRKGFPLSVSGVPPDAFSETGQLWGSPLYDWKAMEKEGYSWWIRRIRRAQDLYDEFRIDHFRGIAGFWAVPSEAKVAMVGKWKVGPGISFFDAISRTVGRVNIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGGGADNPHLPHNHECNQVVYTGTHDNDTIEGWWEALNQEEKSNVSGYLSLTGEDDISWALIQTVLASVAQTAIIPMQDVLGLGSSSRMNIPATQFGNWGWRMASSVSFDSLEREAARLKEMLSIYGRL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02297 574 FunFam 4-alpha-glucanotransferase, chloroplastic/amyloplastic 73 574 - -
Rops10g02297 574 NCBIfam 4-alpha-glucanotransferase 73 560 IPR003385 GO:0004134|GO:0005975
Rops10g02297 574 Pfam 4-alpha-glucanotransferase 82 549 IPR003385 GO:0004134|GO:0005975
Rops10g02297 574 Gene3D Glycosidases 73 574 - -
Rops10g02297 574 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 33 574 IPR003385 GO:0004134|GO:0005975
Rops10g02297 574 SUPERFAMILY (Trans)glycosidases 57 573 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02297 44 574 Glycoside Hydrolase AT5G64860 75.141 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02297 K00705 - gmx:100795007 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02297 10 40720309 40725761 Rops10g02297 10 40720309 40725761 ECH