Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02296 ATGGGGGAGCTAAGATCTGCATCACACAGCTCAACATCTTCAACAACAACAACAACATCACCTCCCCCTCCACCACCTCTCCCATGTTCCCGTAAAATCTCCCTCGTTCAACCATCCCAAAAAAAGAAACACAGACCCAAAGTTGTTCGTGTCTTCCGTTCCGTGTTTCGATCCTTACCCATCATAACTCCCACATGTAAATTCCCATCAGTCCCCGCTATAATCCAAGAAGGTCAAGGTCACCACCACCACCACCACCACAAGAACATTAACAGCAGTGGCCCCAAAGTTTGTGGCACATTGTTTGGTCACCACAAAGGGCGTATTAGCCTTTCTTTTCAAGAGACTCCAAGGTGCCTCCCTTCATTGGTAGTTGAATTATCCATCTCAACCAACACGTTGCACAAGGAGATGGCTGCAGGGATGGTTAGGATTGCACTTGAATGCGAAAAACGGCAAGAAAAGGACAAGACCATGTTGATGGAGGAACCGCTTTGGACAATGTATTGTAATGGGAAGAAAACTGGGTATGGTGTGAGGAGGGAAGCCACAGATGAGGATCTCAATGTGATGGAGCTTCTTAAGGCTGTGACAATGGGTGCTGGTGTCTTTCCAGACGAGGAAGATGTAGATGGAGAATTGGCTTACATGCGTGCACCTTTTGAGCATGTAGTGGGGTCAAAGGATTCTGAGACTCTCTACATGTTGAGCCCTGAGGGAAATACTGGGCCAGAGCTTACTATTTTCTTTGTCAGAATATAA 762 0.4672 MGELRSASHSSTSSTTTTTSPPPPPPLPCSRKISLVQPSQKKKHRPKVVRVFRSVFRSLPIITPTCKFPSVPAIIQEGQGHHHHHHHKNINSSGPKVCGTLFGHHKGRISLSFQETPRCLPSLVVELSISTNTLHKEMAAGMVRIALECEKRQEKDKTMLMEEPLWTMYCNGKKTGYGVRREATDEDLNVMELLKAVTMGAGVFPDEEDVDGELAYMRAPFEHVVGSKDSETLYMLSPEGNTGPELTIFFVRI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02296 253 MobiDBLite consensus disorder prediction 1 44 - -
Rops10g02296 253 Pfam Protein of unknown function, DUF617 97 252 IPR006460 GO:0010274
Rops10g02296 253 PANTHER PROTEIN MIZU-KUSSEI 1 18 253 IPR006460 GO:0010274
Rops10g02296 253 MobiDBLite consensus disorder prediction 1 17 - -
Rops10g02296 253 NCBIfam uncharacterized plant-specific domain TIGR01570 97 253 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02296 Rops-Chr10 40717506 40718509 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02296 - - gmx:100792553 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02296 10 40717506 40718509 Rops10g02296 10 40717506 40718509 ECH
Rops2g00967 2 13599044 13599715 Rops10g02296 10 40717506 40718509 PCT