Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02281 ATGGCAAATTATTCTCCTCTACACTTACCCGAACTTCATTTCCTTTCTCCACAAATCACCCCTAAGTGCCGTCTTTCTCTCTCTAAACTTCCCTCCTCAACTTGTTTTCTTTCCCGCCACTCCACCTCCAATGTTTTTCTTCTCTCCACCCGAATTCGCGCCATCAAAGAAGAATCCACGCTCGCCGAGCCAGTTAACGACGTCCAGTGGAGTGGAAATGGAGTTGCCGCCGCTACCGGAAGCGACCGAGGCAGCACCAACGGCAATGCCGCCGGAGTTGGATACGATAATGGTGCCACCAACGGAAGTTTGGTGAACTATGATTATGGAAACGGTGTAGCTTCGGAGGTGGTAGAAGTTGAAGCCTCCAAGCTAAGTGAAGATGGAAGGAAGAAAAGGTTGGAGGAGATTGGAAAAGAAGATGCGTGGTTTAAACAAGCAGGGAAAGAAAAAGTTGAGGTAGCAGTGGCACCGGGAGGTCGTTGGAGCAGATTCAAGACTTACTCCACAATCCAGAGAACCTTGGAAATTTGGGGATTTGTTGCAACGTTCATCTTCAAGGCTTGGCTGAATAACCAGAAGTTCTCTTACAAAGGAGGAATGACTGAGGAAAAAAAAACCTTAAGGCGGAAGGCCCTTGCCAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCCACATTCATCAAAATTGGCCAGCAATTCTCCACTAGGGTGGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCCGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACTGCTATAGCTATTGTTGAAGAAGAACTTGGGGCTCCTTTGGGTGATATATTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCAAGATTAAAGGGACAGAAGGTTGTTGTTAAAGTGCAACGGCCTGGTCTCAAGGATCTTTTTGATATCGATCTTAAAAATCTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAATCAGATGGTGCCAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACCAAGGAGGCTGCTAATGCAGAATTGTTTGCAAGTAACTTTAAGAACATGGATTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACGCCACAGATTCTGACGATGGAGTATGTTCCAGGGATCAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGCAAAAGGTTAGGGAGATATGCGGTTGAGTCGTACCTGGAACAGATTTTATCCCATGGTTTCTTCCATGCTGACCCCCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGTATCAGTCCAAACATCCGAGAAGGTTTGCTCGAAACATTTTATGGAGTTTATGAGAAAGATCCAGATAAGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTCCCTACTGGTGATATGACTGCTGTTAGGAGAACAGCTCAATTCTTCCTTAACAGTTTTGAGGAGCGTCTAGCTGCACAGAGGAGAGAGAGAGAGGAAGCCACATCTGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATGATGAAGAAGAAACAACGTTTGGCTGCTATTGGTGAAGATTTATTATCCATTGCTGCTGAGCAGCCCTTCCGATTTCCTGCTACATTCACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGCCTTGACCCACGATTCGACTTTACTGAGATTGCCAAACCTTATGCGCTGGAGTTGCTCAGGTTTCGTGAAGCAGGGGTTGAAGTTATCCTAAAGGACTTCAGGAAGAAATGGGATAGGCAATCTCAAGCATTTTACAACTTAATTAGGCAGGCTGATAGGGTTGACAAGCTCGCTGAAATTATCCAAAGACTGGAGCAAGGTGATCTAAAGCTCCGAGTTCGAACTTTAGAATCTGAGAGGGCTTTCCAACGTGTTGCCACTGTCCAGAAGACTATAGGGAATGCAGTAGCTGCTGGGAGCTTAATAAATCTTGCAACAGTTTTGTATCTCAATTCAGTTCGGGTGCCTGCAATAGTAGCATTTGTCTTATGTGCATTCTTTGGTTTTCAAGTGCTCTTGGGCATCGTAAAGGTCAAGAAGCTGGATGAACGGGAACGATTGATAACAGGGACTGCATAA 2265 0.4397 MANYSPLHLPELHFLSPQITPKCRLSLSKLPSSTCFLSRHSTSNVFLLSTRIRAIKEESTLAEPVNDVQWSGNGVAAATGSDRGSTNGNAAGVGYDNGATNGSLVNYDYGNGVASEVVEVEASKLSEDGRKKRLEEIGKEDAWFKQAGKEKVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVATFIFKAWLNNQKFSYKGGMTEEKKTLRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAIAIVEEELGAPLGDIFDQFDYEPIAAASLGQVHRARLKGQKVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREEATSELGFKKPLSKEEKMMKKKQRLAAIGEDLLSIAAEQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDFTEIAKPYALELLRFREAGVEVILKDFRKKWDRQSQAFYNLIRQADRVDKLAEIIQRLEQGDLKLRVRTLESERAFQRVATVQKTIGNAVAAGSLINLATVLYLNSVRVPAIVAFVLCAFFGFQVLLGIVKVKKLDERERLITGTA* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02281 754 Pfam ABC1 atypical kinase-like domain 252 500 IPR004147 -
Rops10g02281 754 SUPERFAMILY Protein kinase-like (PK-like) 254 496 IPR011009 -
Rops10g02281 754 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 131 711 - -
Rops10g02281 754 Coils Coil 524 544 - -
Rops10g02281 754 CDD ABC1_ADCK3-like 253 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02281 Rops-Chr10 40532070 40549875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02281 - - gmx:100791330 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02281 10 40532070 40549875 Rops10g02281 10 40532070 40549875 ECH
Rops10g02281 10 40532070 40549875 Rops9g01814 9 32546074 32564117 PCT