Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02270 ATGGGTGAGGGAGAAAAATTTCAGCTTGGAACTGTCGGCGCTTTGAGTCTATCCGTGGTGTCCTCAGTGTCCATTGTGATTTGCAATAAGGCGTTAATGAGCTCACTGCATTTCATTTTCGCTACTACTTTGACAAGCTGGCATTTGCTTGTCACATTTTGTTCTCTTCATGTGGCACTTAAAATGAGATTTTTTGAGCACAAACCTTTTGAGCAGAAAACTGTGATTGGATTTGGAATTCTAAATGGAGCCTCAATTGGACTTTTAAATTTGAGCCTGGGCTTCAATTCTGTCGGCTTCTATCAGATGACTAAGCTGGCAATCATTCCGTGTACTATTCTGTTGGAGATCCTTTTTTTTGGGAAGAAATTCAGTAAAAGAATACAATTCTCCCTTGCAGTCCTCCTTCTGGGTGTTGGGATTGCAACAGTTACTGATTTGCAGCTCAATGCTTTGGGCTCTTTCTTATCTTTGCTAGCAGTGATTACAACATGCGTTGCTCAGATTATGACAAATACCATCCAGAAGAAATTTAAGGTTTCTTCTACCCAGCTTCTATATCAATCATGTCCATACCAAGCAGCAACCTTGTTAATCTCTGGACCATATTTGGATAAAGTCCTGACCAACCTAAATGTCTTTGCTTTCAATTACACAACACTAGTGGTGCTTGTCATTGTTCTTTCATGCCTTATCTCTATCTCTGTAAATTTTAGTACGTTTCTTGTAATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTTGGACATCTGAAGACATGCCTTGTATTGGCTTTTGGTTATATTATTGTCCGTGACCCTTTCAGCTGGAGGAACATACTGGGCATTTTGGTAGCCATGGTTGGGATGATTCTATATTCCTACTATTGCTCTATTGAGAATCAGCAAAAAGCAGCTGAAGCTGCAGCACAAGCATCACAGGCAAGAGAAGGTGAATCTGATCCTGTCATTAATGTGGAAAATGGAACTGCAGTATTGAGCAAAAGGCCCCCTGTCTGGAACAAAGAAAAAGACTAG 1038 0.4056 MGEGEKFQLGTVGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKTVIGFGILNGASIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEILFFGKKFSKRIQFSLAVLLLGVGIATVTDLQLNALGSFLSLLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLISGPYLDKVLTNLNVFAFNYTTLVVLVIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVRDPFSWRNILGILVAMVGMILYSYYCSIENQQKAAEAAAQASQAREGESDPVINVENGTAVLSKRPPVWNKEKD* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02270 345 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
Rops10g02270 345 PANTHER SOLUTE CARRIER FAMILY 35 13 297 - -
Rops10g02270 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02270 Rops-Chr10 40343047 40347019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02270 22 325 Organic Solute Cotransporters AT1G77610 24.762 2.39e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02270 K15285 - gmx:100786535 593.578