Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02269 ATGGAAACTAAGGTCCCTTTTCCATTTTCATGCTTACTTTACCACTCTGATCACTCACTCTCTTCCTACCCAAAACCTCTGATTCGATCTAAATCTGTGCTCTTTTCTCCCAAATCACAAACCCCTTTTACTCAATTCTCATCAATTTTCTCCCTTTTCCTCCGTTGTCTGCTTGTGGGTGTTGGAGCAAAGACACAGATGGGTGAGGGAGAACGTTTTCAGTTGGGGACTGTGGGAGCCTTGACTCTTTCTGTGGTGTCATCAGTGTCCATTGTGATTTGCAATAAGGCACTGATGAGCTCACTGCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCTCTTCATGTGGCCCTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTGATGGGATTTGGGATTTTAAATGGAATCTCAATTGGACTTTTAAATCTGAGCCTGGGGTTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGTAATCATTCCTTGTACTGTTCTGTTGGAGACCGTTTTCTTTGGAAAGAGATTCAGTAAAAGAATTCAATTTTCGCTAGTTATCCTCCTTCTGGGTGTTGGAATTGCCACTGTCACAGATTTGCAGCTGAATGCTCTTGGCTCTTTCTTATCTTTGCTGGCAGTGATTACAACATGTATTGCTCAGATTATGACAAATACCATCCAGAAGAAGTTTAAGGTTACTTCTACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCTCTGGTCCATATCTGGATAAACTTTTGACCAACCAAAATGTATTTGCTTTCAAGTACACAACACAAGTGACGGTTTTCATAGTTCTTTCCTGCCTTATCTCCATCTCTGTCAATTTTAGTACATTTCTTGTTATTGGAAAGACATCTCCAGTCACCTATCAGGTTCTGGGACACCTGAAAACATGCCTTGTATTGGCATTTGGTTATATTTTAGTCCATGATCCATTCAGCTGGAGAAACATACTGGGTATTTTGATAGCCATGATTGGGATGATTGTATATTCTTACTATTGTAATCTTGAGAATCAACAAAAAACTGTTGAAGCTGCAGCACAATCATCCCAGGCAAGAGAAGCTGAATCTGATCCTCTCATTAATGTGGAAAATGGAAGTGCAGTTAGTGATACTGTTGGACAAAAGTCCCCTGTATGGAGCAAAGACAGAGACTAG 1245 0.4032 METKVPFPFSCLLYHSDHSLSSYPKPLIRSKSVLFSPKSQTPFTQFSSIFSLFLRCLLVGVGAKTQMGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLVIIPCTVLLETVFFGKRFSKRIQFSLVILLLGVGIATVTDLQLNALGSFLSLLAVITTCIAQIMTNTIQKKFKVTSTQLLYQSCPYQAATLLISGPYLDKLLTNQNVFAFKYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILVHDPFSWRNILGILIAMIGMIVYSYYCNLENQQKTVEAAAQSSQAREAESDPLINVENGSAVSDTVGQKSPVWSKDRD* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02269 414 MobiDBLite consensus disorder prediction 376 414 - -
Rops10g02269 414 Pfam Triose-phosphate Transporter family 86 360 IPR004853 -
Rops10g02269 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 114 210 - -
Rops10g02269 414 PANTHER SOLUTE CARRIER FAMILY 35 78 363 - -
Rops10g02269 414 MobiDBLite consensus disorder prediction 392 406 - -
Rops10g02269 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02269 Rops-Chr10 40335433 40340929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02269 67 391 Organic Solute Cotransporters AT1G21870 24.706 9.61e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02269 K15285 - gmx:100786018 577.785