LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g02267	ATGCAATTAACAGTTCCTGAGGGTTTAATAAGTACAAAATGGTCTTGGAGGACTGTCGCAGGGGCCAAGCATATGGGGATCAGAGTTCTGATATCTGCAGCTATGGATGATATACCAGAAAATAGATCGCCATCCTCCTCGCCTAACCAACAACTCTTACCAATTGATGAGGAACTTTGGCTGATGGCTGAAGAGAGGGCCCAAGAGGTACTATGCACAATTCAACCAAATGTAATTTCTGAGGCAAACAGAAAGGACATTATTGATTATCTTCAGAGGCTGATAAGAGGTTACTATGGAGCAGAGGTCTTTGCATTTGGCTCAGTCCCTCTCAAAACCTATCTTCCTGATGGAGATATTGACTTGACAGTTGTCAGTCATGAAAATGTAGAGGAGGATTTGACACAAGTAGTAAGCAGTATACTTGAGAGTGTAGATGATTCTGAATACAAAGTAAAAGACATACAATACATACATGCACAGGTCCAGCTTGTGAAATGCACAGTGAAAAATATAGCAGTTGACATCTCTTTCAATCAGATGGCTGGACTCTATGCTCTGCACTTTCTGGAGCAGGTTGACCAACTTGTTGGGAAAAACCATCTTTTCAAACGCAGTATTATCTTAATCAAAACTTGGTGCTATTATGAGAGCCGACTTCTTGGTGCACACCATGGCTTGTTAGCTACATATGCAGTGGAAATTTTAGTCTTATATATCATCAATCGTTTTCATTCATCAGTGCATGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGAATGGGAACGTTATTGTGTCAGTGTAGATGGTCCGAAAGTCTTATCTTCCCTTCCAGAAATTGTTGAGAAACCAGAATGTGATCAGGGAGAATTGTTGCTCAGTAAAGAGTTTCTGAAAACTTACAGGGATATATGCTCAGTGACAGCTAAGACAAGTGAGACTGTGACAAATCATGAATTTCACCCCAAGTTCTTGAACATTTTGGATCCTCTAAAAAACGACAACAACCTAGGTCGTAGTGTCAGCCAAGCCAACTTATATCGAATAAGATTTGCTCTTGCCCTTGGTGCTCGAAGTCTTAAGGAGATCGTTACACTTCCGGGAGAAAGCATGGGTGCAGCACTTGAGATTTTTTTCAAAAACACATTGAAAAGAAATGGGAAAGGACAAAGACCGGATATTGATGTTCCTGTTCCTGCATTTGGTACTGGAAGATCTGAAGAGGCTGTCCTCATTGGAGATATTGACAGTTACTATGACGGCATACAATATTTTCAGTTGTGTCGGAATTATGCCATGCCACTCACTGCTCATCCCAGTGCTCCATCATCTCCTTCTCAGGCTGAAATCCTTGCACTATCGACACAGCAAAGCTGGAATATGTATTATCAAAGGGGTACCGATGTATATGTCCCTAGACAGACACTATATCATCCTAATGTTTCACAAACAACTTACAGCCTTGAAGAAAGAGAGATATCACGAGGAACAGGCACATACATACCTGATGCGACTCATAATACCTACTGGGATATGCGCCCAAAGGGAACCAGGCCAAGGAGACATGCTCATGTGAATCATCATGCATTCCACAGATCACCTCAGAGAAAGCAAGTGGAGGAGGAGGTTCATTGTGAGACAACAGACATGAGTGGTGAATCAAGATCGTTTGAGCTCTCAAATGATGATTTCCCTCTTCTTCCAACCATGAGGAACACAAGCGAGTCAGCAGCCCAAGAGTCTGCTCAGTTAACTGATCAGGACAAAAGTTCCTCATCCTCTTTACTGAATATTGAGTTTGGAACTATCAGGATTTCACAATCACTGAAAGGACTAAGTTTGGCAACAAAGGATGAGAAAGAAGAATCCGGTGTTTCATCATCTCAAGGTGCTATGCCAGTGGTCCCAATGAAGAGGGATGGGAAATTTCCTTAA	1953	0.4194	MQLTVPEGLISTKWSWRTVAGAKHMGIRVLISAAMDDIPENRSPSSSPNQQLLPIDEELWLMAEERAQEVLCTIQPNVISEANRKDIIDYLQRLIRGYYGAEVFAFGSVPLKTYLPDGDIDLTVVSHENVEEDLTQVVSSILESVDDSEYKVKDIQYIHAQVQLVKCTVKNIAVDISFNQMAGLYALHFLEQVDQLVGKNHLFKRSIILIKTWCYYESRLLGAHHGLLATYAVEILVLYIINRFHSSVHGPLEVLYRFLDYYSTFEWERYCVSVDGPKVLSSLPEIVEKPECDQGELLLSKEFLKTYRDICSVTAKTSETVTNHEFHPKFLNILDPLKNDNNLGRSVSQANLYRIRFALALGARSLKEIVTLPGESMGAALEIFFKNTLKRNGKGQRPDIDVPVPAFGTGRSEEAVLIGDIDSYYDGIQYFQLCRNYAMPLTAHPSAPSSPSQAEILALSTQQSWNMYYQRGTDVYVPRQTLYHPNVSQTTYSLEEREISRGTGTYIPDATHNTYWDMRPKGTRPRRHAHVNHHAFHRSPQRKQVEEEVHCETTDMSGESRSFELSNDDFPLLPTMRNTSESAAQESAQLTDQDKSSSSSLLNIEFGTIRISQSLKGLSLATKDEKEESGVSSSQGAMPVVPMKRDGKFP*	651

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g02267	650	SUPERFAMILY	PAP/OAS1 substrate-binding domain	202	371	-	-
	Rops10g02267	650	PANTHER	PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY	40	401	-	-
	Rops10g02267	650	MobiDBLite	consensus disorder prediction	539	557	-	-
	Rops10g02267	650	MobiDBLite	consensus disorder prediction	572	599	-	-
	Rops10g02267	650	SUPERFAMILY	Nucleotidyltransferase	49	220	IPR043519	-
	Rops10g02267	650	MobiDBLite	consensus disorder prediction	522	599	-	-
	Rops10g02267	650	Gene3D	Beta Polymerase, domain 2	63	201	IPR043519	-
	Rops10g02267	650	MobiDBLite	consensus disorder prediction	617	650	-	-
	Rops10g02267	650	Pfam	Nucleotidyltransferase domain	91	160	IPR002934	GO:0016779
	Rops10g02267	650	CDD	NT_PAP_TUTase	83	190	-	-
	Rops10g02267	650	MobiDBLite	consensus disorder prediction	523	538	-	-
	Rops10g02267	650	Gene3D	-	245	371	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g02267	Rops-Chr10	40299027	40304907	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g02267	-		-	gmx:100787145	732.25