Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02200 ATGGCAGCGGTTCACGTGGTGGTTGTGGTGTTTCTGTCGTACACTTTCCTTTCTGGTGTGGTGAGGTGTGAGAAGGATGATGCCTATGCGAAAGAGATTATGAATGCAGCACAGAAAGAAAAAGAATGGTTGGTTTCGGTGAGAAGGAAAATTCATCAACACCCAGAACTGGCTTTTCAAGAGCACAACACTAGCACTCTTATCCGTAGGGAACTTGATAAGCTTAGCATACCTTACACATACCCAGTTGCCAAAACTGGCATAGTTGCTCAACTTGGCTCTGGTTCTCCTCCCATCATTGCTCTTCGTGCTGACATGGATGCTCTCCCCTTGCAGGAGCTAGTTGAGTGGGAACACAAGAGCAAAATTGACGGCAGAATGCATGCCTGTGGACATGATGCTCACACCACCATGCTACTTGGGGCTGCAAAGTTGCTCAATCAGAGGAAAGATAAACTTCAGGGAACTGTGAGACTTCTTTTCCAACCTGCCGAGGAGGGAGCTGGAGGTGCCTCTGAAATGATAAAAGCAGGAGTTCTTCAAGATGCAGAAGCAATTTTTGCTGTTCATATTGATGCTACAACACCTGCTGGAGCCATAGCATCCATTCCAGGGCCCTTCACAGCTGCTGGATGCATCTTTGAGGCAACAATTGTAGGAGTAGGTGGTCATGCTGCATTGCCCCACCAGAATGTGGATCCAGTGCTGACTACATCATTTGCAATATTGGCACTGCAACAGCTTGTCTCAAGGGAAAAGGATCCTCTTCACAGTCTAGTACTATCAATCACTTTTGTCAAAGGTGGGACTGCATTAAACGTGATCCCATCCCATGTAAAATTTGGAGGCACTTTGAGGAGCCAGACAACTGAAGGCATGTACCATTTTAGACAGAGATTAAAGGAGGTTATTGAAGGACAAGCAGCTGTGCACAGATGTAATGCATCTGTTGATTTCAGAGATGAGGACTTCACTCCATATCCTGCTGTTATCAATGACAATGATTTACATCAACATGTGGTAAGAGTTGGCCAACTTCTGCTTGGTCCAGGCAATATCCATGCAGCCAAGAAGGTGATGGCTGGTGAAGACTTTGCATTTTATCAAGAAGTGATTCCTGGAGTATTGTTTTCCATTGGAATCAGAAATGAGAAAGTGGGATCAATTCACTCCCCACACTCCCCGTTTTTCTTTCTTGATGAGGAAGTTCTTCCAATTGGGGCAGCTCTGCACACTGCCATTGCTGAATTGTATTTCAATGAGCACACTGCTTAA 1275 0.4541 MAAVHVVVVVFLSYTFLSGVVRCEKDDAYAKEIMNAAQKEKEWLVSVRRKIHQHPELAFQEHNTSTLIRRELDKLSIPYTYPVAKTGIVAQLGSGSPPIIALRADMDALPLQELVEWEHKSKIDGRMHACGHDAHTTMLLGAAKLLNQRKDKLQGTVRLLFQPAEEGAGGASEMIKAGVLQDAEAIFAVHIDATTPAGAIASIPGPFTAAGCIFEATIVGVGGHAALPHQNVDPVLTTSFAILALQQLVSREKDPLHSLVLSITFVKGGTALNVIPSHVKFGGTLRSQTTEGMYHFRQRLKEVIEGQAAVHRCNASVDFRDEDFTPYPAVINDNDLHQHVVRVGQLLLGPGNIHAAKKVMAGEDFAFYQEVIPGVLFSIGIRNEKVGSIHSPHSPFFFLDEEVLPIGAALHTAIAELYFNEHTA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02200 424 CDD M20_IAA_Hyd 44 418 IPR044757 GO:0009850|GO:0016787
Rops10g02200 424 Pfam Peptidase family M20/M25/M40 101 415 IPR002933 GO:0016787
Rops10g02200 424 PIRSF Amidohydrol_AmhX 29 423 IPR017439 GO:0016787
Rops10g02200 424 FunFam N-acetyldiaminopimelate deacetylase 209 327 - -
Rops10g02200 424 NCBIfam amidohydrolase 44 407 IPR017439 GO:0016787
Rops10g02200 424 Gene3D - 209 327 - -
Rops10g02200 424 SUPERFAMILY Zn-dependent exopeptidases 31 420 - -
Rops10g02200 424 PANTHER PEPTIDASE M20 FAMILY MEMBER 25 423 IPR017439 GO:0016787
Rops10g02200 424 Pfam Peptidase dimerisation domain 214 308 IPR011650 -
Rops10g02200 424 Gene3D Zn peptidases 45 404 - -
Rops10g02200 424 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 327 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02200 Rops-Chr10 39529909 39534123 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02200 K14664 - gmx:100777587 689.493