Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02187 ATGTCTCAAATAACAATAAAATCTCCAAAACACTGTGCTAGCAAGCAAGAACTGAAAATAGAAAGGAACTACAAGAAGCTCTTCTTTGCTTTGTCAGCATTTTTCAGCTCAATCCTAGCACTGATACTTCTTATATATCTCATCCTCCACCCTGCCAAGCCTCAATTCTCCCTCGAAGAAGTTGATATCTACCAGCTGCACCTTTCAGGACCAAACCTCAACTCCTCCATTCAAATCACTCTTTTTTCCAAGAACCCAAACCAGAAAGTTGGCATTTACTATGACGAGTTTCGAGTTTATGCAGCTTACCAAGGCCAGCAGATAACTAGTGATGCCTCTGTGCCTCCCTTCTACCAAGGCCAGGAAGAGAGTAATCTCTTAACAGCCTCTTTGGTAGGAAATGGGTTACCTGTGGCTCCTTCTCTTAGTTATGAAGTGGGTCGTGATCAAACTGCTGGAAGACTAGTTTTGAATCTAAAAGCTATTGGAAAGCTTCGTTGGAAGGTGGGAACTTGGGTCTCTGGACATTACAGGTTTAATGTTAATTGTGTTTCTGACATGGCCTTTGGACCCTCTATGACTGGAGGTCCTCTGACTTCAACTCAGGGGGCTCGGTGTTCTACCACAATTTAA 633 0.4313 MSQITIKSPKHCASKQELKIERNYKKLFFALSAFFSSILALILLIYLILHPAKPQFSLEEVDIYQLHLSGPNLNSSIQITLFSKNPNQKVGIYYDEFRVYAAYQGQQITSDASVPPFYQGQEESNLLTASLVGNGLPVAPSLSYEVGRDQTAGRLVLNLKAIGKLRWKVGTWVSGHYRFNVNCVSDMAFGPSMTGGPLTSTQGARCSTTI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02187 210 Pfam Late embryogenesis abundant protein 83 183 IPR004864 -
Rops10g02187 210 PANTHER OS05G0367900 PROTEIN 24 184 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02187 Rops-Chr10 39352485 39353348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02187 27 183 EF-hand Containing Proteins AT5G21130 24.845 6.44e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02187 - - gmx:100783857 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02187 10 39352485 39353348 Rops10g02187 10 39352485 39353348 ECH