Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02185 ATGGCCACTTCCTTGAACTTCCACACCACCCTTCACCCCTCTCATTTCCCCTCACCGTCACCGTCACCATCACCATCACCGTCTACACTCCGTCTACTTACTCTGCCTAGAAGACCCTTCTCGACTTTCCTGGGCCAAGGCCCAGCCCAAATCCTCAAATATGCGGTCAGTGCCCCTAGCAACCGTTGCCGTTCACTCTCCGTTCGCATGTCATGGGACGGTCCACTCTCTTCCGTCAAATTAATCATCCAGGGTAAAAATCTCGAGCTCACTGATGCGGTGAAGCAGCATATAGAGGACAAAGTGGGAAAAGCTGTTCAGAAGCACAGTCACTTAGTTAGGGAAGTTGATGTGAGGCTATCAATTAGAGGAGGAGGAGAGTTTGGCCCAGGACCCAGGACACGTAGATGTGAGGTGACTTTGTTTACTAAGAGGCACGGAGTGGTGCGGGCTGAGGAAGATACAGAGAGTATCTATGGGAGTATAGATTTGGTGTCATCAATCATTCAGAGAAAGTTGAGGAAGATAAAGGAAAAGGAGTCAGATCATGGTCGCCATATGAAGGGGTTCAATAGGTTGAAGGTTAGGGAACCGGTTGAGCCAATACCCGTGGATGAGGATGAGCCACTGGAGGAGGAGCAAATATCAATTGATGAGGTTGTCCGCACAAAATACTTTGACATGCCGCCATTGACCGTGCCTGAAGCAATTGAACAGCTTGAAAATGTTGATCATGACTTTTATGCTTTTCGAAATGAAGAAACTGGGGAGATTAATATTGTATACAAAAGAAAAGGAGGAGGTTATGGACTCATTATACCCAAAGGAGACGGTGAAGCAGAGAAATTGGAGCCTTCAGTGGTTGAACCAGCTAGAGAACCATCTCTAAAAGAATGA 897 0.4716 MATSLNFHTTLHPSHFPSPSPSPSPSPSTLRLLTLPRRPFSTFLGQGPAQILKYAVSAPSNRCRSLSVRMSWDGPLSSVKLIIQGKNLELTDAVKQHIEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGPGPRTRRCEVTLFTKRHGVVRAEEDTESIYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEPIPVDEDEPLEEEQISIDEVVRTKYFDMPPLTVPEAIEQLENVDHDFYAFRNEETGEINIVYKRKGGGYGLIIPKGDGEAEKLEPSVVEPAREPSLKE* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02185 298 MobiDBLite consensus disorder prediction 1 15 - -
Rops10g02185 298 FunFam Ribosome-binding factor PSRP1, chloroplastic 81 184 - -
Rops10g02185 298 Hamap Ribosome hibernation promoting factor [hpf]. 79 275 IPR034694 -
Rops10g02185 298 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 82 179 IPR003489 GO:0044238
Rops10g02185 298 MobiDBLite consensus disorder prediction 1 29 - -
Rops10g02185 298 MobiDBLite consensus disorder prediction 277 298 - -
Rops10g02185 298 FunFam ribosome-binding factor PSRP1, chloroplastic 230 281 - -
Rops10g02185 298 Gene3D - 80 184 IPR036567 -
Rops10g02185 298 NCBIfam ribosome-associated translation inhibitor RaiA 80 184 IPR003489 GO:0044238
Rops10g02185 298 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 80 186 IPR036567 -
Rops10g02185 298 MobiDBLite consensus disorder prediction 275 298 - -
Rops10g02185 298 PANTHER 30S RIBOSOMAL PROTEIN 65 284 - -
Rops10g02185 298 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 218 271 IPR032528 -
Rops10g02185 298 CDD RaiA 80 179 IPR003489 GO:0044238
Rops10g02185 298 Gene3D - 230 279 IPR038416 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02185 - - gmx:100803327 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02185 10 39315174 39317308 Rops10g02185 10 39315174 39317308 ECH