Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02171 ATGGCTCAAGCACTGTCATTATCAACTACTTCACCTCTGCTGTCCCAAAAAGCAGGGTACTCTACCAAAACACAAAACAATGCTATTACCCCCTGCATGGCCTTCTTTCCATCAAAGAGACAATTGCCAAGGGTGAGAGCTCAGGCAAATGGTGATAACAAGGACAATTCTGTGGAAGTTCATGTTAACAAGGGAGACCAAGGGACCGCTGTGGAAAGGAAGCCTCGCAGAGTTGCCATGGATATTTCACCATTTGGTCTCTTGGACCCATGGTCACCTATGAGGAGCATGCGCCAGATTTTGGACACAATGGACCGAATTTTCGAAGACACCATGACATTCCCTGGAAGAAACCTGGGAGGAGGGGAGATCCGTGCCCCTTGGGACATCAAAGATGAAGAACATGAAATCAGAATGCGGTTTGACATGCCAGGTCTTTCCAAGGAAGATGTTAAGGTATCAGTGGAAGACGATTTGCTTGTTATTAAAGGTGACCACAAGAAGGAACAAGGTGAAGATTCTTGGTCAAGCAAGAGCTATAGTTCCTATGATACCCGTCTCAAGCTTCCAGATAACTGCGAGAAAGACAAGGTTAAGGCAGAGTTGAAAAATGGGGTGCTTTATCTTACCATTCCAAAGACCAAAGTTGAACGCAAGGTTACTGATGTGGAAATTCAGTGA 681 0.4537 MAQALSLSTTSPLLSQKAGYSTKTQNNAITPCMAFFPSKRQLPRVRAQANGDNKDNSVEVHVNKGDQGTAVERKPRRVAMDISPFGLLDPWSPMRSMRQILDTMDRIFEDTMTFPGRNLGGGEIRAPWDIKDEEHEIRMRFDMPGLSKEDVKVSVEDDLLVIKGDHKKEQGEDSWSSKSYSSYDTRLKLPDNCEKDKVKAELKNGVLYLTIPKTKVERKVTDVEIQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02171 226 SUPERFAMILY HSP20-like chaperones 105 218 IPR008978 -
Rops10g02171 226 Gene3D - 87 226 IPR008978 -
Rops10g02171 226 Pfam Hsp20/alpha crystallin family 129 226 IPR002068 -
Rops10g02171 226 FunFam 26.5 kDa heat shock protein, mitochondrial 86 225 - -
Rops10g02171 226 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 226 IPR044587 GO:0009408
Rops10g02171 226 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 119 226 IPR002068 -
Rops10g02171 226 CDD ACD_sHsps-like 129 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02171 Rops-Chr10 39102473 39104034 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02171 K13993 - gmx:548078 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02171 10 39102473 39104034 Rops10g02171 10 39102473 39104034 ECH