Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02131 ATGAGGTGTCTCCTCGTAGCACAGGATAACTGTTCCAGGCGCCAACAACACACACCGAAAGAGATAAAAAAAAAAAACCATCTCTTTTCCCTGCCGGTGCATGGGTTCGGTTCTTTCTCACTCCGAAAATCCCTTCGTGATCTTCCCCAATTTCGTCAATTCCAACGGGTTTCATTGACCAACATGGCTGAGTGGCAATCCCTTCTGCAATCAATTTTGGTTGGTCTCATTTTCTCGTACCTTCTCGCTAAGCTCATCTCCATCGTTGTTTCCTTCAAAGACGACAATCTCACCATCACACGCACCACCACCACCGACACCGTCACCGTCACGGAACCCGATGCCAAACATGACGACGCCGTTTCCGATGCTGGCCACCCGTTCGAGGCTGAGTCGATGACTGCCGAGCAAGGTAGCGTGAGGAACGATAGCGTTGAAGGTGGCGACGATGACTATGACGACGATTGGGAAGGTGTTGAAACTACTGAATTGGATGAGGCTTTCAGTGCCGCCACCGCTTTCGTCGCCGCCGCCGCCTCCGATCGGTTATCTCAGAAGGTCTCCAGCGATGTTCAGCTTCAGCTTTATGGGTTGTACAAGATCGCCACTGAAGGTCCATGTAGCACTCCACAACCTTCTGCTCTCAAAATGACAGCTAGAGCCAAATGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAAAAGTACATTGATATTGTGACAGAGCTATATCCTTCTTGGCTGGATGGTTCGTCTTTGAGGAGCAAAAGTGGTGATGGTGGTGGCCCTGGTTCAGAGGCTAAGGGAGCAATGGGACCAGTATTCAGCACTTTTGTTTATGAAGAGGAAGGCAATGATGCAAAAATGGAAGCCATTCATGGATTTGCCAGAGAAGGAGATATGGCTAATCTGCTCAAGTGTATTGAAAGTGGTGTTTCAGTAAATTTGAAGGACAGTGAGGGCCGGACACCATTGCACTGGGCTGTGGATCGTGGCCACCTTAATGTCACAGAGTTGCTTGCGGACAGGAATGCTGATGTAAATGCCAAGGATGATGATGGACAAACCCCATTGCATTACGCTGTGACGTGTGAGAGAGAAGCCATAGCCGAGTACTTAGTGAAGCATAATGCAGACATAAATTCAAAGGATAATGATGGGAGTTCCCCGCGTGACATGTGTGAGTCAAACTGGCCGTGTATGCAGCAGCATGTGGGGGAAGTAAACTGA 1245 0.4916 MRCLLVAQDNCSRRQQHTPKEIKKKNHLFSLPVHGFGSFSLRKSLRDLPQFRQFQRVSLTNMAEWQSLLQSILVGLIFSYLLAKLISIVVSFKDDNLTITRTTTTDTVTVTEPDAKHDDAVSDAGHPFEAESMTAEQGSVRNDSVEGGDDDYDDDWEGVETTELDEAFSAATAFVAAAASDRLSQKVSSDVQLQLYGLYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPSWLDGSSLRSKSGDGGGPGSEAKGAMGPVFSTFVYEEEGNDAKMEAIHGFAREGDMANLLKCIESGVSVNLKDSEGRTPLHWAVDRGHLNVTELLADRNADVNAKDDDGQTPLHYAVTCEREAIAEYLVKHNADINSKDNDGSSPRDMCESNWPCMQQHVGEVN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02131 414 PRINTS Acyl-coA-binding protein signature 187 205 IPR000582 GO:0000062
Rops10g02131 414 PRINTS Acyl-coA-binding protein signature 210 225 IPR000582 GO:0000062
Rops10g02131 414 PRINTS Acyl-coA-binding protein signature 231 248 IPR000582 GO:0000062
Rops10g02131 414 Gene3D - 282 406 IPR036770 -
Rops10g02131 414 Gene3D - 158 266 IPR014352 -
Rops10g02131 414 ProSiteProfiles Ankyrin repeat profile. 358 390 IPR002110 GO:0005515
Rops10g02131 414 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 62 403 - -
Rops10g02131 414 Pfam Ankyrin repeats (3 copies) 298 389 IPR002110 GO:0005515
Rops10g02131 414 SUPERFAMILY Ankyrin repeat 291 400 IPR036770 -
Rops10g02131 414 SUPERFAMILY Acyl-CoA binding protein 163 253 IPR035984 GO:0000062
Rops10g02131 414 MobiDBLite consensus disorder prediction 113 152 - -
Rops10g02131 414 Pfam Acyl CoA binding protein 165 245 IPR000582 GO:0000062
Rops10g02131 414 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 164 254 IPR000582 GO:0000062
Rops10g02131 414 ProSiteProfiles Ankyrin repeat profile. 325 357 IPR002110 GO:0005515
Rops10g02131 414 ProSiteProfiles Ankyrin repeat region circular profile. 358 390 - -
Rops10g02131 414 ProSiteProfiles Ankyrin repeat region circular profile. 325 357 - -
Rops10g02131 414 PRINTS Ankyrin repeat signature 374 388 IPR002110 GO:0005515
Rops10g02131 414 PRINTS Ankyrin repeat signature 326 341 IPR002110 GO:0005515
Rops10g02131 414 SMART ANK_2a 325 354 IPR002110 GO:0005515
Rops10g02131 414 SMART ANK_2a 292 321 IPR002110 GO:0005515
Rops10g02131 414 SMART ANK_2a 358 387 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02131 Rops-Chr10 38585923 38590807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02131 62 408 Acyl Lipid Metabolism Gene Families AT5G53470 65.043 6.79e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02131 - - gmx:100816670 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02131 10 38585923 38590807 Rops10g02131 10 38585923 38590807 ECH