Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02130 ATGAGGAACGAGAGAAAAGAATCTTTATACACTCCATCGGTGAAGATCTGTCGCCGCTGCACTTCAACTTCATTGGAACACTGTCACAACTCCGGCAATGGCAAAGATGAGTTGAAGAGGGAAACGAAATATCCTGCAGGAAGAGAAAAGATCAGAACGAGAGAAAGAGGAAGGATAATATTTACTTTTATTATTTTTAATTCGAATGAGATTGTAACCGCTGTTGCGATTTCTTCCCCTTGTTCCCTACTCTTTTCTCTGACTCTCTCACTCACTCTCCTTTTCAACTCTTTCGTTCCTTCAGATCTCTTCTCCGATTTCAGGTATAGCATGGCAATGGAAGTCACTCAGCTGCTTTTGAATGCTCAATCAATAGATGGGACTGCACGGAAGCATGCTGAAGAAAGTCTGCGACAGTTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTCTCTGGAGAGTTAGCAAGTGAAGATAAACCTGTTGATAGCCGAAAGTTGGCTGGTTTGATACTTAAAAATGCATTGGATGCCAAGGATGAAAACCGAAAGAGAGAATTGGTTCAAAGATGGTTGTCACTGGAGCCGGCAGCAAAGACCCAGGTTAAGTCATGCTTGCTGCAGACACTATCTTCTCTTGTACACGATGCTCGGTCTACAGCAACTCAAGTTATTGCAAAAGTTGCTGGGATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATAGGATCACTTTTATCAAATATTCATCAAGTTCCTGCACATGTCAAACAAGCAACTTTGGAGACTCTGGGATATTTGTGTGAGGAAGTCTCTCCTCAAGTTGTTGATCAAGACCAAGTAAATAAAATACTTACTGCTGTAGTTCAAGGTATGAATGCATCTGAAAGGAACAATGATGTTAGGCTTGCTTCTACTAGGGCGTTATATAATGCTCTTGGATTTGCTCAGGCAAATTTTAGCAATGATATGGAGCGTGATTACATCATGAGAGTTGTTTGTGAGACAACTATGTCCCCTGAAGTGAAAATACGACAGGCAGCTTTTGAATGTTTGGTCTCAATTGCTGCCATGTATTATGAGAATTTGGCTCCTTACATCAAGGATATATTTAACATCACAGCAAAGGCTGTCAGGGAAGATGAGGAGCCTGTTGCTCTTCAAGCCATTGAATTTTGGAGTACAATTTGCGATGAGGAGACTGATATCTTGGAAGAATATGCGGGTGATTCCAACGGGGACTCTGAAGTACCTTGTTTTTATTTTATTAAGCAGGCTCTTCCTGCACTTATCCCTCTGCTGTTGGAAACATTACTCAAACAAGAAGAGGATCAAGATCTGGATGAAGGTGCGTGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGTACTGCTGGAGATGATATTGTGCCACTGGTAATGCCCTTCATTGAGGAGAATATTACAAAACCAGATTGGAGACAAAGGGAGGCAGCCTCGTATGCATTTGGCTCTATCTTGGAAGGGCCTTCCCCAGACAAATTAGCACCTCTTGTTAATCATGCTTTACCATTTATGCTTAGTGCTCTAATGAAGGACCCAAACAACCATGTGAAAGACACCACTGCTTGGACTTTGGGACGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGCACACCAATTATTAATGAGGGAAATTGCCAACAGATTATTACAGTTCTCCTCCAGAGCATGAGGGATGTCCCCAATGTTGCTGAGAAAGCCTGTGGTGCTCTGTATTTTCTTGCACAGGGTTATGAGGATGTGGGACTAACATCTCCCCTAACTCCTTTTTTTCAGGAAATTGTCCAATCCCTTCTCACTGTTACCCACAGAGAGGATGCTACAGAATCACGATTGAGAACCGCGGCATATGAAACATTGAATGAAATAGTAAGGTGTTCAACAGATGAAACAGCCCCATTAGTGTTACAACTAGTTTCTGTCATCATGGTGGAGTTGCACAAATGTCTTGAAGCACAAAATCTTTCATCTGGTGAGAGAGAAAAGCAGAGTGAACTGATAGGCCTTCTTTGTGGGTGCTTGCAAGTAATCATTCAGAAGCTAGGGTCTTCAGAATCTACTAAATATGTCTTCTTGCAGTATGCTGATCAGATAATGGGACTGTTCTTCAGGGTCTTTGCTTGTAGAAATGCCACTGCACATGAGGAGGCCATGCTAGCCATTGGAGCCCTTGCCTATGCAATAGGCCCTGATTTTGCTAAATACCTGCCTGAATTTTACAAGTTTCTGGAGATGGACCTTCAGAATTTTGAGGAGTACCAAGTTTGTGCTGTCACTGTTGGTGTGGTAGGGGACATATGCAGGGCATTGGAGGATAAAATACTGCCTTACTGTGATGGGATTATGACTCAACTTCTGAAGAATTTGTCAAGTGATAATTTACACCGTTCTGTGAAGCCCCCATTATTCTCATGCATTGGTGATATAGCTCTTGCAATTGGAGATAACTTTAACAAATACTTAATGTACGCAATGAACACGCTACAGCTTGCTGCTGAGATGTATGCCCACACATCAGGTTTTGATGATGAAATGACAGAGTACATTAATTCTTTGAGAAATGGGATATTAGAGGCATATTCTGGGATTTTTCAAGGGTTTAAAAATTCATCAAAATCCCAGCTTTTGATTCCCTATGCGCCTCACATCCTCCAGTTCTTGGACAGCATATACATGGAAAAAGACATGGATGAAGTGGTTATGAAAACAGCAATTGGAGTCCTTGGAGATCTAGCAGATACACTTGGAAGCAATGCTGGTTCTTTAATACAGCAGTCTTTGTCAAGCAGAGAATTTTTAAATGAATGTTTGACCTCGGATGATCATCTGATTAAAGAATCTGCTGAGTGGGCCAAGTTGGCTATCAATCGTGCTATATCTGTTTGA 2946 0.4185 MRNERKESLYTPSVKICRRCTSTSLEHCHNSGNGKDELKRETKYPAGREKIRTRERGRIIFTFIIFNSNEIVTAVAISSPCSLLFSLTLSLTLLFNSFVPSDLFSDFRYSMAMEVTQLLLNAQSIDGTARKHAEESLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLEPAAKTQVKSCLLQTLSSLVHDARSTATQVIAKVAGIELPQKQWPELIGSLLSNIHQVPAHVKQATLETLGYLCEEVSPQVVDQDQVNKILTAVVQGMNASERNNDVRLASTRALYNALGFAQANFSNDMERDYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYENLAPYIKDIFNITAKAVREDEEPVALQAIEFWSTICDEETDILEEYAGDSNGDSEVPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTAGDDIVPLVMPFIEENITKPDWRQREAASYAFGSILEGPSPDKLAPLVNHALPFMLSALMKDPNNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNCQQIITVLLQSMRDVPNVAEKACGALYFLAQGYEDVGLTSPLTPFFQEIVQSLLTVTHREDATESRLRTAAYETLNEIVRCSTDETAPLVLQLVSVIMVELHKCLEAQNLSSGEREKQSELIGLLCGCLQVIIQKLGSSESTKYVFLQYADQIMGLFFRVFACRNATAHEEAMLAIGALAYAIGPDFAKYLPEFYKFLEMDLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLKNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQLAAEMYAHTSGFDDEMTEYINSLRNGILEAYSGIFQGFKNSSKSQLLIPYAPHILQFLDSIYMEKDMDEVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSREFLNECLTSDDHLIKESAEWAKLAINRAISV* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02130 981 FunFam Importin subunit beta-1 113 981 - -
Rops10g02130 981 PANTHER IMPORTIN BETA 117 950 IPR040122 GO:0006606
Rops10g02130 981 SMART IBN_N_2 133 213 IPR001494 GO:0006886|GO:0031267
Rops10g02130 981 ProSiteProfiles Importin-beta N-terminal domain profile. 133 213 IPR001494 GO:0006886|GO:0031267
Rops10g02130 981 Pfam Importin-beta N-terminal domain 133 212 IPR001494 GO:0006886|GO:0031267
Rops10g02130 981 Pfam HEAT-like repeat 491 547 - -
Rops10g02130 981 Gene3D - 108 981 IPR011989 -
Rops10g02130 981 SUPERFAMILY ARM repeat 113 971 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02130 Rops-Chr10 38566657 38575240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02130 K14293 - gmx:100785130 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02130 10 38566657 38575240 Rops10g02130 10 38566657 38575240 ECH