Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02126 ATGGAAGCTTCTTTTCTTCTTCCATCATCCTCCTTCACTGGACTCAGGACAAGCAAAAAGTTTCTGCATGTGCTATCACTATGGGAGTCCAAAAGCATAATATGCTTCCCAGTTTGTAATCAAAAGCATAATTACAATCGAAAGCTTTACATTGTACCCATTAGGACTGTTTCTCAGTTCTGCGTCTCAAGATCTTCGGTTGAGTCATTGGAATTTGGTGCAGCAGGCCCACACAGTGATGCTCATTCAGGTTTTTCAGCTCCAAATGACTATCAGAGAGTCAGCAATTTTGAGAGAGAGTTGGAAGAGTTATTTGATGAAGTGAAAAGAATGATTAAGATGGGAAACAAAAATGATGCTATAGACCTACTAAATGCAAATTATGAAGTGGTGAAAGAGACACTAAATGCAGGCACTAAAGGCATAGAAGAAGCTGCGACTTTGGATGTCCTAGCACTGGGTTACATGGCTGTTGGAGACTTAAAAGTTGTTAGTTCTCTGTTGAATTTGATGAAGGAAGTTGTTGATGGCTTAAAGGATGATGCACCACGTCTAGATTCAATACTTATGCATATGGGAAGTATGTATGCGGCATTGAGCAAGTTTGAAAAATCATTAGACACGTATCAGAGGACTGTCTACATTATGGAGAGGACCTATGGTAAGGATAGCACTATTCTTGTCACACCCCGTTTGGGTATGGCAAAAGTTCTCGGTTCTATCGGAAAAGCAACAAAAGCAATAGAGATATATCAGCATGTAATCACTCTCTTGGAATCAGATAGAGGTGCTGAAAGTAAGGATTTGGTTGTACCGTTACTTAATCTTGGCAATCTTTTACTGAAAGAAGGAAGAGCCCATGATGCAGAAACTCATTTTACTAGGGTTCTAAACATATACACGAAGTTATATGGACAAAACGATGGAAGAATTGGGATGGCTATGAGTTCCCTAGCCCGAGTGAAGTGTGCTCTAGGGAAGTCAGATGAAGCAATTCATTTGTTTAAACGTGCTCTACAGGTCATGAAGGATTCAAATTACATGTCACTGGATGACAGTATTATGGAAAAGATGAGGGTAGATCTAGCTGAATTACTCCATGCTGCTGGGAGAGGACAAGAAGGCAGAGAGCTATTAGAGGAGTGCTTGTTGATCACTGAGAGGTCCAAAGGAAAGGAGCATCCCAGCTTAGTGACACACATGAAAAATCTTGCAACTTCATATTCACGGTCAAAGAATTACGTGGAGGCTGAGCACTTGCTGAGAAGAAGTTTGGAAATCATGAAAAAGCATAAGGGAACTGATGACCAGGCCATCAGCTTTCCAATGTTGCATCTTGCAGTTACACTATACCATTTGAAAAACGATGAAGAAGCAGAGAAACTTGCCCTGGAGGTTTTGCACATCCGTGAGAAGGCATTTGGAGAATATTCTCTTCCTGTTGGGGAGGCTTTGGACTGTTTAGTGTCAATTCAAACTAGACTTGGTAAGGATGACAATGATTTACTCGAGCATCTTAGAAGGATCCTGAATATCCAAGAGAGAGGATTTGGATATGAAAGTGAGGAAGTTTTGGTTACCCTTAAAAAAATTGTATACTACTTGGATAAGCTAGGGAGAAAAAGTGAAAAGCTTCCCCTAGAGAGAAGGTTGTCTGTGCTTAGGAAGAAGTATAATCAAATGGTTCATCAGTAA 1695 0.4041 MEASFLLPSSSFTGLRTSKKFLHVLSLWESKSIICFPVCNQKHNYNRKLYIVPIRTVSQFCVSRSSVESLEFGAAGPHSDAHSGFSAPNDYQRVSNFERELEELFDEVKRMIKMGNKNDAIDLLNANYEVVKETLNAGTKGIEEAATLDVLALGYMAVGDLKVVSSLLNLMKEVVDGLKDDAPRLDSILMHMGSMYAALSKFEKSLDTYQRTVYIMERTYGKDSTILVTPRLGMAKVLGSIGKATKAIEIYQHVITLLESDRGAESKDLVVPLLNLGNLLLKEGRAHDAETHFTRVLNIYTKLYGQNDGRIGMAMSSLARVKCALGKSDEAIHLFKRALQVMKDSNYMSLDDSIMEKMRVDLAELLHAAGRGQEGRELLEECLLITERSKGKEHPSLVTHMKNLATSYSRSKNYVEAEHLLRRSLEIMKKHKGTDDQAISFPMLHLAVTLYHLKNDEEAEKLALEVLHIREKAFGEYSLPVGEALDCLVSIQTRLGKDDNDLLEHLRRILNIQERGFGYESEEVLVTLKKIVYYLDKLGRKSEKLPLERRLSVLRKKYNQMVHQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02126 564 SMART tpr_5 398 431 IPR019734 GO:0005515
Rops10g02126 564 SMART tpr_5 270 303 IPR019734 GO:0005515
Rops10g02126 564 SMART tpr_5 186 219 IPR019734 GO:0005515
Rops10g02126 564 SMART tpr_5 228 261 IPR019734 GO:0005515
Rops10g02126 564 SMART tpr_5 440 473 IPR019734 GO:0005515
Rops10g02126 564 SMART tpr_5 312 345 IPR019734 GO:0005515
Rops10g02126 564 SUPERFAMILY TPR-like 246 469 IPR011990 GO:0005515
Rops10g02126 564 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 110 542 - -
Rops10g02126 564 Coils Coil 94 114 - -
Rops10g02126 564 Gene3D Tetratricopeptide repeat domain 93 356 IPR011990 GO:0005515
Rops10g02126 564 Gene3D Tetratricopeptide repeat domain 357 563 IPR011990 GO:0005515
Rops10g02126 564 SUPERFAMILY TPR-like 112 259 IPR011990 GO:0005515
Rops10g02126 564 ProSiteProfiles TPR repeat profile. 186 219 IPR019734 GO:0005515
Rops10g02126 564 Pfam MalT-like TPR region 187 469 IPR041617 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02126 - - aprc:113852595 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02126 10 38522768 38527508 Rops10g02126 10 38522768 38527508 ECH