Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02063 ATGGCCAACATTCTTCGCTTGGTTGTTGCTGTTCTTGCCAATGCTGCCTCAGTAGCACTTTATGCTGCGCCAATGGTTACCTTTAAAAGGGTTATAAGGAAGAAAAGCATAGAGGAGTTTTCATGCATTCCTTACATCATTGGACTGTTAAACTGTCTCCTTTTTACTTGGTATGGATTGCCTGTTGTCAGCTACAAGTGGGAAAATTTCCCTCTGGTCACAGTTAATGGAATTGGGATTGTTCTTGAGTTGTCCTACGTTCTCATTTATTTTTGGTATGCTTCAACCAAAGAAAAGGTGAAGGTATCCATTGCTACAATATCAGTTCTGCTTGTGTTCTGTGTAATTGCTGCTGTCTCGGCTAGTGCCTTGCATGACAATGGTCACCGAAAGCTACTTGTGGGTAGCTTTGGCTTAGGTGTTTCAGTAGCAGTGTATGGATCTCCTCTGGTTGTCATGAAGAAAGTTATACAAACCAAGAGTGTGGAATTCATGCCACTACCGTTATCCATGTGCTCATTCTTTGACAGTGTACTCTGGTTGACTTATGGACTCCTCATTCATGATATATTTGTTGCGGGGCCAAGTGTCGTTGGAATTCCCATAGGCATCCTCCAGCTCTTCCTCCACTGCAGATACCGGAAAGTGAGTGTTGGGGAAGAGCCAAACAACATGGACCTGGAACTTGGAAGGGTAACTTAG 702 0.4359 MANILRLVVAVLANAASVALYAAPMVTFKRVIRKKSIEEFSCIPYIIGLLNCLLFTWYGLPVVSYKWENFPLVTVNGIGIVLELSYVLIYFWYASTKEKVKVSIATISVLLVFCVIAAVSASALHDNGHRKLLVGSFGLGVSVAVYGSPLVVMKKVIQTKSVEFMPLPLSMCSFFDSVLWLTYGLLIHDIFVAGPSVVGIPIGILQLFLHCRYRKVSVGEEPNNMDLELGRVT* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02063 233 Pfam Sugar efflux transporter for intercellular exchange 133 215 IPR004316 GO:0016020
Rops10g02063 233 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
Rops10g02063 233 Gene3D - 10 107 - -
Rops10g02063 233 Gene3D - 133 224 - -
Rops10g02063 233 PANTHER RAG1-ACTIVATING PROTEIN 1 17 217 IPR047664 -
Rops10g02063 233 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Rops10g02063 233 FunFam Bidirectional sugar transporter SWEET 7 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02063 Rops-Chr10 37525785 37529461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02063 1 215 Miscellaneous Gene Families AT5G53190 56.744 9.90e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02063 K15382 - gmx:100813119 360.533