Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02044 ATGCAGAGGAAGGGATCGAGCCAGCGACTTTCGAGCATGAGTCATAATCGATCTCGCATTCCTGCACTCCTCATCTCCATGTTCGCTACTTTCGCTTCTATCTACGTCGCTGGAAGGTTGTGGCAGGACGCAGAGAACCGCGTTTATCTAATCAAAGAGCTCGATAGGATCACTGGCCAGGGACAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGATGCCCTTGAGATGGAACTCGCTGCAGCTAGACAAGAGGGTTTTGTTTCAAAGCCATTGATAGAGACTAATGGAACTTACTCTAAGAGAAGGCCCTTGGTAGTGATAGGTATACTGACAAAATTTGGTCGCCAGAAGAATAGAGATGCAATTCGTAAGGCATGGATGGGAAGTGGTGCAGCTTTGAAGAAAATTGAAGACGAAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGTGCAAATCGTGGGGACAGTCTGGATAAAGACATTGATCATGAGAATAGGCTGACTGATGACTTCCTAATTCTTGATGATCATGTGGAAACAAATGAGGGACTGCCAAAGAAGGCTAAATTGTTCTTTGCTCATGCTGCAGAGAAATGGGATGCTGAGTTTTATGCTAAAGTCAATGATGACGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATATGGACAAACCTCGTGTTTACATGGGATGCATGAAATCAGGCGAAGTTTTTTCTGAACCGAACCATAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGATGTATGTCATATCACGAGCTTTGGCTAAATTCATATCAATAAATAGATCTATTCTGCGTACCTATTCCCATGATGATGTGAGTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAGCATGTTGACGAGGCAAAGTTTTGTTGCTCATCTTGGTCGACAGGAGCAATTTGTGCGGGTGTTTGA 1032 0.4293 MQRKGSSQRLSSMSHNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAARQEGFVSKPLIETNGTYSKRRPLVVIGILTKFGRQKNRDAIRKAWMGSGAALKKIEDEKGIIVRFVIGRSANRGDSLDKDIDHENRLTDDFLILDDHVETNEGLPKKAKLFFAHAAEKWDAEFYAKVNDDVYVNIDALGATLATHMDKPRVYMGCMKSGEVFSEPNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSILRTYSHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02044 343 Coils Coil 76 96 - -
Rops10g02044 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops10g02044 343 Pfam Domain of unknown function (DUF4094) 19 95 IPR025298 -
Rops10g02044 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 83 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops10g02044 343 Gene3D - 110 335 - -
Rops10g02044 343 FunFam Hexosyltransferase 106 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02044 Rops-Chr10 37083332 37089034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02044 23 343 Glycosyltransferase AT5G53340 73.832 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02044 K20854 - gmx:100807753 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02044 10 37083332 37089034 Rops10g02044 10 37083332 37089034 ECH