Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02037 ATGAAGAGGAGCAGAGATATGGAGAAGAGGTCAGAGATTAACTCTGCCATTGAAGAGTTGTCCATGTTGGTTATAGTTAAGCCTGGAGGAAATCAGGAGGCTGCACGTATCCCCACCAAGCCTTTCCTATCTCTATGTTACTTGGTTCTACAAGTTCTTGATAAGATAGGGCCAACAATGGCTGTTTTGAGACAAGACATTCACCAGAATATTAAGAGGTTGGAAGTGATGCATGAATCAAATCCCTCACTGAATTCAAATTTGGTTGAGATATTGAAATTAGAAGCTAGCAAAGGCCTTGTGGGGAAGAAGTCTTGCTGCAGTAAAGCCTTTGTTTGGCTCACTAGATCCCTGGATTTCTCGGTAGCATTGTTACAAACACTAGAAAAAGATCCTAAAAAGAATATGGAGCAAGCAGTACAAGAGTCTTATGCTGCAACTTTGTCACCATGGCATGGATGGGTTGCATCAGCTGCTTTCAGAGTGGCTCTAAAACTAGTGCCTGATAGTAAAACTTTCATGGATCTCCTCAGGGAAAAAGATGAAAACTGTGACACCTTAAAGGAGAATATGCAGATCTTGGTTTCTTTGTTTGTGCCTTTTCTTGAGGATATCCACTGTATTATAAAACTGTACAACTTGGACAGGCTTAAGTCAAAATGA 663 0.4072 MKRSRDMEKRSEINSAIEELSMLVIVKPGGNQEAARIPTKPFLSLCYLVLQVLDKIGPTMAVLRQDIHQNIKRLEVMHESNPSLNSNLVEILKLEASKGLVGKKSCCSKAFVWLTRSLDFSVALLQTLEKDPKKNMEQAVQESYAATLSPWHGWVASAAFRVALKLVPDSKTFMDLLREKDENCDTLKENMQILVSLFVPFLEDIHCIIKLYNLDRLKSK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02037 220 Gene3D Glycolipid transfer protein 1 215 IPR036497 -
Rops10g02037 220 FunFam Glycolipid transfer protein 2 2 215 - -
Rops10g02037 220 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Rops10g02037 220 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 8 208 IPR014830 GO:0005737|GO:0120009|GO:0120013
Rops10g02037 220 SUPERFAMILY Glycolipid transfer protein, GLTP 34 217 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02037 Rops-Chr10 36995400 36997348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02037 12 202 Acyl Lipid Metabolism Gene Families AT2G34690 20.312 4.63e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02037 - - gmx:100527808 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02037 10 36995400 36997348 Rops10g02037 10 36995400 36997348 ECH