Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02036 ATGCCACCAGCAGTGTCATCTACTTTTGAGTCAGAGAGTCACCCTGTGAGATATGTGCACACAGTTTCAGAGGCAGGTCGCCTTCTTCCTTCAGCCAGTCGCTGGAATTCCATAGCACTTGACTTTAAACTTGCCCCTAAGTCTTCCACTGCCTATGAATCTATCCCTTCCCAATACCCAAAATCTATTGACCACAATCTTGTCATCACTGATAGGAAGCACTTTCATCGATTTATTTATGTTTCAGTGGCAATAATTTTTGCTATCTTTGCAGCAGTTCTTCTGGTGCATTTTTTACCTCAGAGGCACAAGCATCAAGGGTCTTCAATCAATCTCAAATTGGCAATAAACCAGGCTCTAACATTTTATGATGCCCAAAAATCTGGACACTATCCAAGGAATAGTCCAGTGAAATTTCGGGGAGATTCAGGATTACTGGATGGGAATTCAGCTAAGGCTAATCTTATTGGTGGATATTATGATTCTGGCAACAACATTAAGTTTACCTTCACAACAGCTTATACTATGACCTTGTTGAGTTGGACTGCAATTGAATATCAAAGTAAATATGCTGATATTGGTGAGCTTGACCATGTCAAGGACATCATCAAATGGGGTTGTGACTACTTGCTCAAGGTGTTAATTCTCCCAGATTCAACATCTGGATCCAATTTTACATTGTATTCCCAGATTGGAAGTACCATTAGTAATAACAATGAGCCCAATGATATAAGTTGCTGGGAAAGACCTGAAGACATGAATTATGAGAGACCAGTTTCAATTTGTGATAGCTCTGCTTCAGATTTAGGTGGTGAAATTGTGGCAGCATTATCTGCAGCATCGATGGTATTCAAAGAAGACAGAGATTATTCAGGGAAACTAATCCAAGCAGCAAAAAGCCTATATAAGGCAGTCACTAGGGGAGATCCTAAGAAGCAAGGGACCTTTACCATGGTTGATGCCTGTGGAAAACAAGCAAGAATGCTTTACAATTCTTCTACAAAGAGTGATGAAACAAGTTTTGACAAAGGGGTCTTTTATTGGAATAACAAGCTCAATGCTATTGAGGTTTTGCTTACTGGTATTCGATATTTCCGTGATCCTGGCTTCCCACATGAGGATGTTTTGAAACTCTCATCAAACTCTACTGACTCCCTCATGTGTTCTCATCTATTCAACAAATATATGAGCAGGACAGCTGGTGGATTGATCATCCTGAAACCTGATAATGGGCCATTACTCCAGTATGCTGCAACAGCATCTTTTCTCAGTAAATTATACAGTGATTACCTTGATCATCTCAAAGTATCTGGTGCAAGTTGCAAGACTGATGTATTCTCAGTGGCAATGCTTCGTGATTTTGCTAGTTCTCAGGTTAACTACATCTTGGGACAAAACCCTATGAAAATGAGCTATTTAGTGGGCTATGGTGACAGGTTTCCAGTCCAGGTTCATCATAGAAGTGCATCAATTCGTTGGGATAACCGGAAGTACTATTGTGAAGATGGTAAGGGATGGCTAAACTCTAAAGATCCGAATCCACAAATTCTTTTGGGAGCCATGGTGGGAGGGCCAGACACTAATGATAATTTCATTGATCAAAGGAGCAACAAACGGTTCACTGAGCCAAACATAGCAAGCAATGCTGGCTTAGTTGCAGCATTGATTGCACTTCAAGATCCTCCTTACAATTCACGTGACTTCAAGAACTCATTGTGGGGATGGACTTGA 1731 0.4073 MPPAVSSTFESESHPVRYVHTVSEAGRLLPSASRWNSIALDFKLAPKSSTAYESIPSQYPKSIDHNLVITDRKHFHRFIYVSVAIIFAIFAAVLLVHFLPQRHKHQGSSINLKLAINQALTFYDAQKSGHYPRNSPVKFRGDSGLLDGNSAKANLIGGYYDSGNNIKFTFTTAYTMTLLSWTAIEYQSKYADIGELDHVKDIIKWGCDYLLKVLILPDSTSGSNFTLYSQIGSTISNNNEPNDISCWERPEDMNYERPVSICDSSASDLGGEIVAALSAASMVFKEDRDYSGKLIQAAKSLYKAVTRGDPKKQGTFTMVDACGKQARMLYNSSTKSDETSFDKGVFYWNNKLNAIEVLLTGIRYFRDPGFPHEDVLKLSSNSTDSLMCSHLFNKYMSRTAGGLIILKPDNGPLLQYAATASFLSKLYSDYLDHLKVSGASCKTDVFSVAMLRDFASSQVNYILGQNPMKMSYLVGYGDRFPVQVHHRSASIRWDNRKYYCEDGKGWLNSKDPNPQILLGAMVGGPDTNDNFIDQRSNKRFTEPNIASNAGLVAALIALQDPPYNSRDFKNSLWGWT* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02036 576 Pfam Glycosyl hydrolase family 9 115 555 IPR001701 GO:0004553|GO:0005975
Rops10g02036 576 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 461 487 IPR018221 -
Rops10g02036 576 PANTHER ENDO-1,4-BETA-GLUCANASE 85 559 - -
Rops10g02036 576 SUPERFAMILY Six-hairpin glycosidases 110 560 IPR008928 GO:0005975
Rops10g02036 576 Gene3D - 109 340 IPR012341 GO:0005975
Rops10g02036 576 Gene3D - 341 561 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02036 Rops-Chr10 36992255 36994545 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02036 61 558 Glycoside Hydrolase AT5G49720 43.068 1.12e-128 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02036 K01179 - gmx:100805472 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02036 10 36992255 36994545 Rops10g02036 10 36992255 36994545 ECH