Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02026 ATGTTGAGCGCAGGATTGTTCTCCTATCTCAGTTTAGAAGGGTGGTTTTCTTGTGTTATATACTATATCTTGAGGGATACTGGTTTCCATACAGAAAAGACAGGAGGGAAAATTCAAATAGAAGGTTTTGTGGGAGTGGAGACACTTCACAGTGTCTGGATTACAGCAAAGCATAGAGTTGATCCAATCAAAGGAAGACCACTTTTTCAGCCAATTCTAAGTTTCTGGTGGATGGGTTTGATGGGTATTCTATGTTCTTCCATATTTCTTTTTACACTCGTTGAGTCCACCAGCAGATCAGGGAAGATGTGGCCCCTAAATGTAGGTGTGGTGTCTACAGGAACTGTCAGCTGGACAGTCTTCAGTTCAAGTATATTTGTGCTTGTTGCTCTTGCTCTCTCCATGTATCTGATATTCGAGCATTTAGCTGCCTATAATCAGCCTGAGGAGCAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTTTATGCATTGGAATCGTTTTTGTCACTATTGGATTCCAGTGCAGCATTTAACTGTGAAGTTATTCGGGACTGCTATGAGGCTTTTGCATTATATTGTTTTGAAAGATACTTGATAGCTTGCTTAGGCGGTGAGGACAAAACAATTCAATTTATGGAACGGATGAGCCTAACAGACTCCAGCACTCCTCTCCTGAAAGAAGCATATGCATATGGAGTTGTAGAGCATCCATTTCCTTTAAATTGCTTCTTAAGAGATTGGTATCTTGGCCCTGACTTCTATCAATCTGTGAAAATTGGCATAGTACAATATATGATACTGAAAATGATCTGTGCATTGCTGGCAATGATCCTCCAGTCTTTTGGGGTTTATGGAGAGGGGAAGTTTGAATGGAATTATGGGTATCCCTACTTGGCAAGTATTCTTAATTTTAGTCAGACATGGGCCCTGTATTGCCTTGTACAATTCTATACTGTCACCAAAGATAAATTGGAGCCAATCAAACCATTAGCAAAATTTCTAACTTTTAAGTCAATCGTCTTCCTGACATGGTGGCAAGGTGTGGCTGTTGCATTTCTTTTTTCTGTGGGAGCATTGAAAGGGTCACTGGCTCAAGAGCTGAAAACACGAATACAAGACTACATCATCTGTATTGAGATGGGCGTTGCTGCTGTTGTGCACCTTTATGTCTTTCCTGCAGTACCTTACAAAAGAGGAGAGAGGTGTGTCCGCAATGTAGCAGTTATGGCTGACTATGCATCATTAGGGACACCACCTGATCCTGCAGAGGTTCGTGACTGTGAGCGCTCAACTAGAATGAGGCTGGGTCGACATGATGAGAGAGAGAAGACGCATATGAAATTTACCCACAATGTTCGTGATGTGGTTGTTGGAAGTGGTGAAATAATTGTTGATGACATGAAATTTACAGTTTCACATGTGGTAGATCCTGTTGAAAAGGGTATTGCAAAGATAAACAAAACCTTACATGAGATATCAGAAAATGTGAAACGCCATGACGAGGAGCGGAGGAGAAAAGCCAAGGTCAAGGATGATAGTTACCTTGTTCCCCTGCGTTCATGGACAACTGAATTTTCTGATGTTCATGACAGACTTGTGGAAGGAAGTGTCAGTGATAGTGGTTTGCCCAGTGGAAAGAGACATCTCCAATCCAAATCGTCAGCCTCCAGGATGAGAAGATAG 1689 0.4162 MLSAGLFSYLSLEGWFSCVIYYILRDTGFHTEKTGGKIQIEGFVGVETLHSVWITAKHRVDPIKGRPLFQPILSFWWMGLMGILCSSIFLFTLVESTSRSGKMWPLNVGVVSTGTVSWTVFSSSIFVLVALALSMYLIFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSSAAFNCEVIRDCYEAFALYCFERYLIACLGGEDKTIQFMERMSLTDSSTPLLKEAYAYGVVEHPFPLNCFLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILQSFGVYGEGKFEWNYGYPYLASILNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLTFKSIVFLTWWQGVAVAFLFSVGALKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYKRGERCVRNVAVMADYASLGTPPDPAEVRDCERSTRMRLGRHDEREKTHMKFTHNVRDVVVGSGEIIVDDMKFTVSHVVDPVEKGIAKINKTLHEISENVKRHDEERRRKAKVKDDSYLVPLRSWTTEFSDVHDRLVEGSVSDSGLPSGKRHLQSKSSASRMRR* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02026 562 MobiDBLite consensus disorder prediction 537 562 - -
Rops10g02026 562 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 116 507 IPR005178 -
Rops10g02026 562 Pfam Organic solute transporter Ostalpha 121 398 IPR005178 -
Rops10g02026 562 Coils Coil 484 504 - -
Rops10g02026 562 SMART Solute_trans_a_2 119 398 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02026 Rops-Chr10 36844496 36850254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02026 - - gmx:100804401 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02026 10 36844496 36850254 Rops10g02026 10 36844496 36850254 ECH