Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02024 ATGGATTTGATTAAAGCTTTGAGCCTGAAACCGTGGCGAATTCCTCCTTCAGCACCATTTATCACCAATATCACCAGCTTCTATGCCCCTCCTCGCTCTACAACAAAATTCTCTTCTCAGTTTCGGACATTTCCATATATTGCTATAAAGCCCCCAATTCTTCATGCAAAGAAGAGAAGCTCTGATTCAGAGCCATTTCTAGAACCTTCCATTGTTCAAGAAGTATCTTTGGACGAAGAAGAAGAAGAAGAGGCCCTCCTTGATGAAGTCGAACACGAGGATCAAGTGGGTGGTGACGAAGGCGACGAATACTTTGAAGAAGAAGAGGATGGAGACGAATACTATGAAGAAGAAGAGGTTGGCGTGCCCTATGCAGGGGATGGCGGCGCAGGCGGTGGAATATCCCTTGCCGGAACATGGTGGGATAAGAAAGCACTAGCAATTGCTAAAGATGTTACTCTGTCTTTTGATGGTGACTTGCAAATTTATGCTTTTAAAACTTTGATCAATTCCACCATTCAAGTGCGCATTGAGAAGCTTTCCAACAAGTCTGGCTCCCCCAGCATGGAAGATATTGAAGCCTTTTCTACAACCTATAGAACAAAATTGGATGAAGCTGAACTTGCCAAATTTGTTCCTGAGAATTTAAGTTTGGAGGTGTCCTCTCCTGGCGTTGAAAGAATAGTTCGGATTCCGGATGACCTAGATCGATTCAAGGACCGACCTATGTACGTGAAATACACCATTAATGATGATTCGAATAATCCATCTGCAGAAAGTGATGGAATCTTCAAGCTTGAATCCTTTGACATGGAAACAAAATGTTGCACCTGGGGTTTAGCAGACGTGAAAATGAACAGACAGAAAGCAGGGAAAGGAAGACCACTAAATAAAAAACAAAGAGAATGGCGTTTAAGTACTCCCTTTGATTCCTTACGTTTTGTACGGTTGCACTCTGATATTTAA 966 0.4244 MDLIKALSLKPWRIPPSAPFITNITSFYAPPRSTTKFSSQFRTFPYIAIKPPILHAKKRSSDSEPFLEPSIVQEVSLDEEEEEEALLDEVEHEDQVGGDEGDEYFEEEEDGDEYYEEEEVGVPYAGDGGAGGGISLAGTWWDKKALAIAKDVTLSFDGDLQIYAFKTLINSTIQVRIEKLSNKSGSPSMEDIEAFSTTYRTKLDEAELAKFVPENLSLEVSSPGVERIVRIPDDLDRFKDRPMYVKYTINDDSNNPSAESDGIFKLESFDMETKCCTWGLADVKMNRQKAGKGRPLNKKQREWRLSTPFDSLRFVRLHSDI* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02024 321 SUPERFAMILY YhbC-like, N-terminal domain 170 226 IPR035956 -
Rops10g02024 321 Hamap Ribosome maturation factor RimP [rimP]. 143 321 IPR003728 GO:0042274
Rops10g02024 321 Pfam RimP N-terminal domain 170 226 IPR028989 -
Rops10g02024 321 MobiDBLite consensus disorder prediction 77 110 - -
Rops10g02024 321 PANTHER OSJNBA0006B20.18 PROTEIN 57 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02024 Rops-Chr10 36829481 36832396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02024 - - gmx:100783320 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02024 10 36829481 36832396 Rops10g02024 10 36829481 36832396 ECH