Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02020 ATGGATTTATGGGACAGTTGGTGGGTTTTGCAATTTATGCAGATGCTGGGTTTCTTTAGTTTTTGGATCTCATTTCCCAAGTTTAGGACTTTAATCTCAAAAGCTTTTGGCTTTGGTCACAAAATTATCAAGGGTAACTGCAATGCCTGGATCCTTGTTTCTTTCAATGGGCTAATCACAACTGGGTCTTTGCTATCCTTCATCTTGGTCCTTTCCTGGGCATACTCATTTGTGTTTTGCAGTCCTTCCTCAGTGATTCAGAGTTATGAGATTCCCAACAGTTCTCACTCACTAGTTCAGAGTTATGAGAATCTAAACTCCAATCTTTCAATGGGCACCTGCAATGTGTTTGAAGGAAGTTGGATCCGGGATGATAGCTACCCTTTGTATGATGCTTCTCACTGTCCATTTGTAGAAAGAGGTTTCAATTGCCTTGCTAATGGGCGTAAAGACAGAGGTTATACAAAATGGAGGTGGAAGCCCAAGAACTGTGATATTCCAAGGTTTGATGCACGTAGAATACTTGAACAACTTCGTGGAAAAAGGGTGGTTTTTGTTGGGGATTCATTGAGTAGGACACAATGGGAGTCCTTGATATGTTTGCTGATGACAGGAGTTGAGAATAAGAAGAGTGTCTATGAAATCAAAGGCCACAAGATCACAAAACAGATTGGGTTTTTAGGTGTAAGATTTAGTTCTTTTGATGTTAGAATCGATTTTTATCGATCAGTTTTCCTGGTGAAGTCAGGTCCGGTGCCTACACATGCACCCCAAAGGGTGAAGACAACACTGAGATTGGACAAGATGGATGATATTAGCCATGAGTGGATTGATTCAGATGTTCTTATATTCAATTCAGGTCACTGGTGGACACGGACTAAGCTTTTTGACATGGGCTGGTATTTTCAGGTTGGTAGCTCACTGAAGCTTGGAATGCCAATCAATTCTGCTTTTAACTCAGCTTTGCACACGTGGGCATCTTGGGTTGAGAATACAATTAACACAAACAGGACAAGAATATTCTTCCGTACTTTTGAATCATCTCATTGGAGGGGAGGACAGAGCCGTAGTTCCTGCAAAGTGACACGAAGACCTTGGAAGAGAACCAATGGGAGGGACCGAAGCCCAATTTCAGATATGATCAACAAAGTTGTCAAAAATATGAGTGTTCCTGTAACAGTTCTGCATGTTACTCCTATGGGTGCATATAGGAGTGATGGGCATGTAGGTACTTGGAGTGACAAACCATCTGTGCCTGATTGCAGTCATTGGTGTTTACCAGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCATATTTGTTACAAAAAAATGGAGCAAATTAA 1347 0.4128 MDLWDSWWVLQFMQMLGFFSFWISFPKFRTLISKAFGFGHKIIKGNCNAWILVSFNGLITTGSLLSFILVLSWAYSFVFCSPSSVIQSYEIPNSSHSLVQSYENLNSNLSMGTCNVFEGSWIRDDSYPLYDASHCPFVERGFNCLANGRKDRGYTKWRWKPKNCDIPRFDARRILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVENKKSVYEIKGHKITKQIGFLGVRFSSFDVRIDFYRSVFLVKSGPVPTHAPQRVKTTLRLDKMDDISHEWIDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSLKLGMPINSAFNSALHTWASWVENTINTNRTRIFFRTFESSHWRGGQSRSSCKVTRRPWKRTNGRDRSPISDMINKVVKNMSVPVTVLHVTPMGAYRSDGHVGTWSDKPSVPDCSHWCLPGVPDMWNEILFSYLLQKNGAN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02020 448 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 76 437 IPR029962 GO:0016413
Rops10g02020 448 Pfam PMR5 N terminal Domain 113 165 IPR025846 -
Rops10g02020 448 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 166 439 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02020 Rops-Chr10 36782336 36785876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02020 - - gmx:100802445 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02020 10 36782336 36785876 Rops10g02020 10 36782336 36785876 ECH